Daktulosphaira vitifoliae (grape phylloxera): 126908457
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Entry
126908457 CDS
T09738
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126908457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvt03021
]
126908457
03036 Chromosome and associated proteins [BR:
dvt03036
]
126908457
Transcription machinery [BR:
dvt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126908457
Chromosome and associated proteins [BR:
dvt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126908457
PBAF complex
126908457
GBAF(ncBAF) complex
126908457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
126908457
NCBI-ProteinID:
XP_050546489
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MMALGPKKDGSPNIKFFESSETLNMLESVRTWLMKNHKKYLQTDPPTNKSLAALILQLIQ
FQEDNLGKNVSKPPLTRLPMRCFLDFKPGGALCHLLATVYKFKVDQGWRRFDFQVSKSPS
RMDRSIEMFMNIEKALISAKSLTLPVIFIQPDVDKKEKLKEIIKRHQGTITENEQEATHI
VYPNVDPIDEEYARPVYKNRERWSLLHWYYFPDSYDSWVNVDLPVDPPELLYCNQHSSPW
RVTSSWVLDTDVHNEWMNEEDYEVDDTGKKTAHKLRLSVEDLMNNDLSSGKKKPKRKRTP
SPPSKPNKRKSGRGSSVMSLKKNKVDDDSDDLTRDLDDPISEPNISEISVNLNQSKTGSS
SSKKDSDSQPLRSGTLMDLDEDLDKGDDNKPFDANGQDGTSCPASGVSSTGGGALSTIKE
EGPEDNATEQMHHIVIPSYAAWFDYNSIHTVEKRALPEFFNNKNKSKTPEIYLAYRNFMI
DTYRLNPTEYMTSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTAMGPPPTSH
FHILSDTPSGLQPVNPPRTPQPSAAKTLLDLEKKPLMTEKDNIQHSESLSNFGLKLDQYA
KKPGLLRNKTAAGLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLP
IEDPYLEDFETGGAIGPLSYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFA
AIRDEVPSALMDAHVKNIEAATTDGKYDPAVGLLQSGIAGTYPEKEEDNKEDKKELDDTK
DTKDIVNTDTEKAIITKTEKDESEKEKDSKEEPMEVDKKPINENLGTQSTGVNCTTEGGS
ERTVKDSEVQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL
ETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHHRLQIAGAAGVIPPPVIT
NPEHAAPASPAPPITT
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatggccttgggtccaaaaaaggatggcagtcctaatattaaattttttgagtcatct
gaaactctaaacatgttagaaagtgtcaggacgtggctcatgaaaaaccataaaaagtat
ttgcaaacggatccacctaccaataaatcacttgcagcgttgatattacaactaattcaa
ttccaagaagataatcttggtaaaaatgttagcaagcctccacttacccgcctgcctatg
cgttgctttttagatttcaaaccaggtggtgcattatgccatttattggctacagtatat
aaatttaaagtggatcaaggttggagaagattcgatttccaggtcagtaagagcccatct
agaatggataggagtattgaaatgtttatgaacattgaaaaagctttaataagtgccaaa
agtttaactttgccggtaattttcattcaacccgatgttgataaaaaagaaaaactaaaa
gaaattattaaaagacatcaaggaactataacagagaatgaacaagaagctactcatata
gtgtatccaaatgttgacccaatagatgaagagtatgcaagaccagtttacaaaaataga
gaacgttggtcattacttcattggtattatttcccagattcatatgactcatgggttaat
gtagaccttccagtcgatcctccagaattactatattgtaatcaacactcttccccttgg
cgggttacatcatcttgggttttagatacagatgtccacaatgaatggatgaatgaagaa
gactatgaagttgatgatactggtaaaaaaactgctcataagctgcgactttctgttgaa
gatttaatgaataatgatttatccagtggtaaaaagaaaccaaaaagaaaaaggacacca
tctcccccttctaaacctaataagcgtaaaagtggcagaggaagttctgtgatgagttta
aaaaaaaataaagttgatgatgatagtgatgatcttacaagagatcttgatgacccaata
tcagaacctaatatttctgaaataagtgttaatttgaatcaatctaaaactggttcatct
tcctcaaaaaaagatagtgattctcaacctcttagaagtggtactcttatggatttagat
gaagatttagataaaggagacgataataaaccatttgatgcaaatggacaagatggaaca
agttgtcctgcttctggtgtgtctagtactggaggaggagctttatctacaattaaagaa
gaaggtccagaagataacgctactgaacaaatgcatcatattgtaataccaagttatgca
gcatggtttgactacaactctattcatactgtagaaaaacgtgctttacctgagttcttt
aataataaaaacaaatctaaaactcctgaaatatatttagcatacagaaacttcatgatt
gatacttacaggcttaatccaactgaatatatgactagcactgcagctagacgtaatttg
gctggagacgtttgtgctataatgagagttcatgcttttcttgaacaatggggtttaatt
aactatcaagttgatgctgatagtagaccaacagcaatgggtcctccacctacatcacat
ttccatattctttctgatacgccttcaggattacagcctgttaatcctcctagaactcca
caaccttcagcagccaaaacacttctagatttagagaaaaaacctttaatgacagaaaaa
gataatatccaacattcagaatctttgtctaactttggacttaaattagatcaatatgca
aaaaaaccgggtctcttaagaaacaaaactgctgctggactaacacgtgattggacagaa
caagaaactcttttattgcttgaaggcttggaaatgtacaaagatgattggaataaagtt
tgtgagcatgttggcacaaggactcaagatgagtgtattttacatttccttcggttacca
atagaagatccatacttagaggattttgaaactggtggtgctattggtccattgtcttac
caaccaataccttttagtaaatctggcaaccctatcatgtcaactgtggcatttttggct
tcagtagttgaccctcgagtagctgctgcagcagctaaggctgctatggaagagtttgct
gcaattagagatgaagttccttcagcattaatggatgctcatgttaaaaacatagaagcc
gctacaactgatggaaaatatgatccagcagttggtctcttacagagtggtatagctgga
acatatccagaaaaagaggaagataataaagaagataaaaaagaactagatgatactaag
gatacaaaagatatagtgaatacagatactgaaaaagcaataattaccaaaacagaaaaa
gatgaatctgagaaagaaaaagattctaaagaggagcccatggaagtagataaaaaacca
attaatgaaaatttaggtactcaatcaactggagttaattgtactacagaaggaggatct
gagagaactgtaaaagattctgaagtacaagctgctgctgctgctgctttagctgctgct
gctgttaaagctaaacatttagctgctgtggaagaacgaaaaattaaatctttagttgct
ttattagttgaaacccaaatgaaaaaattagaaattaaattgagacattttgaagagtta
gaaactaccatggaaagagaacgagagggtttagaatatcaaagacaacaattgattcag
gaacgacagcaatttcatttagaacaattaaaagctgctgaattcagagcacgacaacaa
gctcaccatagattacaaatagcaggtgctgcaggagtcattccaccaccagtaattaca
aacccagaacatgctgcgccagcttcacccgcaccacctattaccacataa
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