KEGG   Daktulosphaira vitifoliae (grape phylloxera): 126910451
Entry
126910451         CDS       T09738                                 
Name
(RefSeq) roquin-1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
dvt  Daktulosphaira vitifoliae (grape phylloxera)
Brite
KEGG Orthology (KO) [BR:dvt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dvt03000]
    126910451
   04121 Ubiquitin system [BR:dvt04121]
    126910451
Transcription factors [BR:dvt03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    126910451
Ubiquitin system [BR:dvt04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126910451
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 NuA4 zf-C3HC4_4 zf-C3HC4 Vesi_VP2 5_3_exonuc Seryl_tRNA_N zf_CCCH_4 Muted
Other DBs
NCBI-GeneID: 126910451
NCBI-ProteinID: XP_050548992
LinkDB
Position
Unknown
AA seq 903 aa
MPIQAPQWTDFLACPVCCNAFDVKARHPISLGCAHTICKSCLSNLPKKQCPFDQNLINIE
IDHLPINYALLQLVGATLPINDNIPRSLSKSMTVEERQLYNKSKKCVEHLALYLKSFITG
GGQSTSAGLSRPMQRKLVTLINCQILENEGRLRTIRAARSLGERCMTELILHHQSAQQLS
TNLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKT
SIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYENLRREHDAQIVEIATEAGLRIAP
DQWSALLYGDSAHKSHMQSIMDKLQSPQSFSQSVQELIIALQRTGDPAKLSSLRSNFELL
AAVDPNPSLEWCTWDKLYSVLESAKVVVAGLTDFVKSHGNSNKGLKNELIQNQANTTRYK
VSMCRDLMTRGTCPRGGGCTFAHSEDEIEKYRNKNRKTRNIAIGVDHEFLTNKPKFLPKE
QYDFMCNKKPLMLPETTKEIATIPVEHSYIVPNGQAYYQSGQQQMYQVGQYGHDVYRPHP
RNMMMNPTNQMYVDQNITSHSNKMKNLSSSLISLQNRKQELMGQIDRVMTACTLTPDQVD
FDRYSMWDNGLFHQKNGLPSPVNIQTGRPMLIRSDSILADPDEFVPFDIAVNGKYGPIGG
NGGNPTAESPQSAINNQTNGNGKSIRRPCSLPIPSQAAAAAAAQAQFFSSTTTTTISTPL
GTLRGARNSPVAASWFFNSPQGYPAAAHIVASPVGAIGQSYITIHSPAGMMEPSNFFSSH
KTPKNLIAESQKMKHQLKNLEKKINDLKLATHNVAAKETEKLSEELAQIEKDIQIKEQQF
LTQWHSETATITTWGDGIWSSTTSTGFTTQQDDSYNNSNVVKQTDIKWDGIENDSERAIA
EEV
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgcccattcaagcaccacagtggacagattttttggcatgcccagtgtgctgtaatgca
tttgatgttaaagcaaggcatccaataagtttaggatgtgctcacacaatatgtaaatcg
tgcctctcaaatttgcctaaaaaacaatgtccatttgatcaaaatttgattaacatagaa
attgaccaccttccaattaattatgctttacttcaattggttggagctacactaccaata
aatgataacattcctagatcattatcaaaatctatgacggttgaagaacgtcaattatat
aataaatcgaaaaaatgtgtagaacatcttgctttatatttaaagtcatttattacaggt
ggaggacagtcaacaagtgctggactttctcgtccaatgcagcgcaaattggttactcta
attaattgccaaatattagaaaatgaaggtcgtttaagaacaatcagagctgcaagatca
ttaggtgaacgttgtatgacagaattgatacttcatcatcagagtgctcaacaattgtca
actaatttatgggcagctgtaagggcacgtggttgtcaattccttggaccagctatgcaa
gaagaagttttaaaattagttttacttgctcttgaagatggctctgctttgtctagaaaa
gttttggttatgtttgttgttcagcgattagaaccacatttcccacaagcatcaaaaacc
agtattggccatgtagttcagttactttatagagcttcatgttttaaggtttcaaaacgt
gaaggagattcttcacttatgcagcttaaagaagagttccgtacatatgaaaatttgaga
cgtgagcatgatgctcaaatcgtagaaatagctactgaagcaggacttcgaatagctcct
gatcaatggtcagcacttctttatggtgattctgctcataaatcacacatgcagagtatt
atggacaaattacaaagccctcaatctttttctcaatctgttcaagagcttattattgct
ttacaacgcactggagatccagcaaaactatcatctctaagatcaaattttgaacttcta
gcagcagttgatcctaatccaagtcttgaatggtgtacatgggataaattatattctgtt
cttgaaagcgctaaggtagtagtagcaggtttgacagattttgtcaaatctcatggaaac
agtaataagggtctaaaaaatgagttaatccagaatcaagcaaacactactaggtataaa
gttagtatgtgtagagatttaatgacgcgtggaacttgcccacgaggtggaggctgtaca
tttgctcattctgaagatgagatagaaaagtatagaaataaaaacagaaaaactagaaac
atagccattggtgttgatcatgaatttttaacaaataaacctaagtttctacccaaagaa
cagtatgattttatgtgtaataaaaaaccactgatgttaccagaaactaccaaagaaatt
gctacaattccagtggaacattcgtatattgtaccaaatggtcaagcatactatcaatct
ggtcaacaacagatgtaccaagtaggacagtatggtcatgatgtttatagacctcatcct
cgtaatatgatgatgaatccaactaatcagatgtatgtggatcaaaatataactagtcat
tccaataaaatgaaaaatttatcctcaagtttaatatctcttcaaaatcgcaaacaagag
ctaatgggtcaaatagatagagttatgacagcttgtactctaacccctgaccaagtagac
tttgatcgctattcaatgtgggataatggtttatttcaccaaaaaaatggtttgccttct
cctgtaaatattcaaactggccgaccaatgttaattcgatcagattcaattttggcagat
ccagatgaatttgttccatttgatatagcagttaatggaaaatatggtccaattggtggc
aatggtggaaatccaacagctgaatccccacaatcagctattaataatcagactaatgga
aatggaaagtccatacgtcgtccatgtagtttgccaataccttcacaagcagctgcggca
gcagcagcacaagctcaatttttcagttcaactactacaacaactattagtacacccttg
ggtactctacgtggagccagaaatagcccagtagctgcatcttggttttttaattctcca
cagggctacccagctgctgctcatattgttgcatcaccagttggagcaattggtcagagt
tatattactattcacagtccagctggtatgatggaaccatccaacttttttagtagtcat
aaaacacctaaaaatttaattgccgagtctcaaaaaatgaaacatcaattgaaaaattta
gaaaaaaaaatcaatgacttaaaacttgctacccacaatgttgctgctaaagaaactgaa
aaattgtctgaagaattggcacaaattgaaaaagatatacaaattaaagaacaacaattt
ttgacacagtggcattctgaaactgctactataacgacttggggtgatggaatttggtca
agtaccacatcaactggtttcactactcaacaagacgattcttacaacaacagtaatgta
gttaaacaaacagatataaaatgggatggaattgaaaatgattctgaaagagcaatagcc
gaagaagtttaa

DBGET integrated database retrieval system