KEGG   Nitratidesulfovibrio vulgaris Hildenborough: DVUA0113
Entry
DVUA0113          CDS       T00171                                 
Name
(GenBank) type III secretion protein, YscD family
  KO
K03220  type III secretion protein D
Organism
dvu  Nitratidesulfovibrio vulgaris Hildenborough
Brite
KEGG Orthology (KO) [BR:dvu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dvu02044]
    DVUA0113
Secretion system [BR:dvu02044]
 Type III secretion system
  Type III secretion core apparatus
   DVUA0113
SSDB
Motif
Pfam: Yop-YscD_ppl_3rd Yop-YscD_cpl Y4YQ_C BON FHA
Other DBs
NCBI-ProteinID: AAS94349
UniProt: Q72WH6
LinkDB
Position
pDV:151240..153048
AA seq 602 aa
MSSSGDIILRVFSGPHTGAEVVLPPGDHVIGTEDSCDIILSDGGLAPRHVSIGVTAGVPG
APSTVHITPLDGPVRYDDAEVPATGVTLAPATPCHIGETCLAWNTPGAPWETFDLTPRQS
VTAADAAAGTSAMAGGDPAASTLSANAAASASPSGAAGDAPSGASQTPTLSATPANEVDD
LVLGSPTRPHHEKRWRSALLAAAVMLLCTSTVVITLETRPPAPPERAAHLAAQLHAAGLT
ALRVEARPEGVVVSGLLDDEAQRIRLWDMARNLLYRVQLEVAVRSDVLHAVKAAFNSRGI
YPEVTFMPAADTTPTTPPLSAQAMPKAVPGTPDAGTGLAQSPDTATTSMAGTGTAASGVA
GTGGNGGNNSDGKSIGGMTAGTVPAGAATLASAPLATPQAKAGLRVAGYMRDGVVEAWAF
DALREDVPQMPHVTRDLRYASQVAPVLDPLLADAGLKHVQTRYLSGVVQLSGDLDAAQRE
ALDTVLAQTRTRLQVDIPFEVVQSAPAPDKKQQEAPAPVAGRGFTPARQEAAAPAQAEGP
QGIDVRSVTLTPLRFVTTGDGQRIFEGGMLPGGYVVESISTTELHLRKDGRSTIYRLRGS
HD
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgagcagtagcggcgacatcatccttcgcgtcttctccggcccccatacgggggccgag
gtggtgcttccgcccggcgaccatgtcatcggcaccgaagactcgtgcgacatcatcctc
tccgacggcgggcttgcgccacgccacgtctccatcggcgtcaccgccggagtgcccggt
gcgccatccaccgtccacatcaccccgcttgacggcccggtgcgctacgacgatgccgag
gtgcccgccacgggcgtgaccctcgccccggcgaccccctgccacatcggggagacctgc
cttgcatggaacacccccggcgcaccgtgggagaccttcgacctgacaccgcgccagtcc
gtgacggctgccgacgcggcagcgggaacatccgccatggcgggtggcgaccctgcggcg
tccacgctttccgccaatgcggccgccagtgcatccccatcgggcgcggcgggcgatgcc
ccctcgggcgcatcccagacgccaacactttcggcaacgcctgccaacgaagttgacgac
ctcgtactcggcagccccacccggccccaccacgaaaaacgctggcggtcggccctgctg
gctgccgccgtcatgctgctgtgcaccagcacggtggtcatcacccttgagacacgcccg
cccgcaccccctgaacgcgcggcgcaccttgcggcgcagcttcatgccgcgggactgacc
gccttgcgcgtcgaggcacgccccgaaggggtggtcgtctccgggctgctggacgacgag
gcacagcgcatccgcctgtgggacatggcacggaacctgctgtaccgggtacagcttgag
gtggctgtgcgcagcgacgtgctgcacgccgtgaaagccgccttcaacagccgtggcatc
taccccgaggtgacgttcatgcccgccgccgacaccacgcccaccacaccgcccctgtcc
gcgcaggccatgcccaaggctgtgccgggtacgcccgacgccgggacgggtctcgcgcaa
agcccagacacggcgaccaccagcatggcgggcaccggcacggcagcgagtggcgttgcg
ggtacaggcggcaacggcggcaacaacagcgacggaaagagcatcggcggcatgacggca
ggcaccgtgcccgccggggctgcgacgctggcatccgccccgcttgcgaccccgcaagcc
aaggcgggtctgcgtgtcgcgggctacatgcgcgacggcgtggtggaggcatgggccttc
gacgcgctgcgcgaagacgtgccgcagatgccgcacgtcacccgcgacctgcgctatgcc
agtcaggtggcccccgtcctcgacccgctgcttgccgacgcggggctgaagcatgtgcag
acgcgttacctttcaggcgtggtgcaactctccggcgacctcgacgcggcacagcgcgag
gccctcgacaccgtgctggcgcagacgcgcacgcggcttcaggtcgacatccccttcgag
gtcgtccaatcggccccggcacccgacaagaaacagcaggaggcccccgccccggtggcg
ggccgcggcttcacccccgcacggcaagaggccgcagccccggcacaggccgaggggcca
cagggcatcgacgtgcgcagtgtcactctcacgccgttacgcttcgtcaccacgggcgac
ggacaacgcatcttcgaaggcggcatgctgccgggcggctatgtcgtcgaatccataagc
accaccgaactccatctgcgcaaggatggacgttccaccatctaccgactgagaggttcc
catgactga

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