KEGG   Nitratidesulfovibrio vulgaris Hildenborough: DVUA0131
Entry
DVUA0131          CDS       T00171                                 
Name
(GenBank) CRISPR-associated protein, CT1133 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
dvu  Nitratidesulfovibrio vulgaris Hildenborough
Brite
KEGG Orthology (KO) [BR:dvu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dvu02048]
    DVUA0131
Prokaryotic defense system [BR:dvu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    DVUA0131
SSDB
Motif
Pfam: Cas_Csd1 VPS18_solenoid_1st
Other DBs
NCBI-ProteinID: AAS94334
UniProt: Q72WF8
Structure
LinkDB
Position
pDV:171056..172894
AA seq 612 aa
MILQALHGYYQRMSADPDAGMPPYGTSMENISFALVLDAKGTLRGIEDLREQEGKKLRPR
KMLVPIAEKKGNGIKPNFLWENTSYILGVDAKGKQERTDKCHAAFIAHIKAYCDTADQDL
AAVLQFLEHGEKDLSAFPVSEEVIGSNIVFRIEGEPGFVHERPAARQAWANCLNRREQGL
CGQCLITGERQKPIAQLHPSIKGGRDGVRGAQAVASIVSFNNTAFESYGKEQSINAPVSQ
EAAFSYVTALNYLLNPSNRQKVTIADATVVFWAERSSPAEDIFAGMFDPPSTTAKPESSN
GTPPEDSEEGSQPDTARDDPHAAARMHDLLVAIRSGKRATDIMPDMDESVRFHVLGLSPN
AARLSVRFWEVDTVGHMLDKVGRHYRELEIIPQFNNEQEFPSLSTLLRQTAVLNKTENIS
PVLAGGLFRAMLTGGPYPQSLLPAVLGRIRAEHARPEDKSRYRLEVVTYYRAALIKAYLI
RNRKLEVPVSLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVF
HMLLKNASNHTAKLRKDPERKGSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQ
RKALFTKKNKEN
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgatcctgcaggcattgcatggctattaccagcgcatgagcgcagaccccgatgcgggg
atgccgccctacgggaccagcatggagaacatctcgttcgcgctggtgctggatgcgaaa
gggacgctacggggcatcgaggacttgcgggaacaggaaggcaagaagctgcggccccgc
aagatgctggttcctatcgcggaaaagaaggggaacggcatcaaaccgaacttcctgtgg
gagaacaccagttatattctgggggtggacgccaagggcaagcaggaacgtacagacaag
tgccacgccgcgttcattgcccacatcaaggcctactgtgacactgcagaccaagacctt
gccgccgttctgcagttccttgaacacggcgaaaaagacctctccgcttttccggtttcg
gaagaggtcatcggctccaatatcgtctttcgcatcgagggcgaaccgggcttcgtccat
gagcgtccggctgcgcggcaggcttgggccaactgcctgaaccggcgggagcaagggcta
tgtggtcaatgcctcatcaccggggagcgccagaagccgattgcccaactccatccgtcg
atcaaaggcgggcgagacggcgttcgcggtgcacaggctgttgcctcgatagtgtccttt
aacaacaccgcctttgaatcttacgggaaagaacagtcgatcaatgcacccgtcagtcaa
gaagcggcattctcttatgtcacagccctgaattacctgctcaacccgtcaaatcgacag
aaggtcaccatcgctgacgccaccgtggtcttctgggccgaacgcagcagcccggcagag
gacatctttgcaggcatgttcgacccgccttccaccacggcgaaaccggagtcctcgaac
gggacgccgccggaagacagtgaagaaggcagccagcctgacacagccagagacgacccc
catgccgctgccagaatgcacgacctgcttgtggccatccgttccggcaagcgcgccacg
gacatcatgcccgacatggacgagtccgtgcgcttccatgtgcttggcctgtcgcccaac
gccgcccgcctgtccgtccgcttctgggaggtcgataccgtcggtcacatgctggacaag
gtggggcggcactaccgtgaactcgagatcattccgcaattcaacaacgagcaggagttc
ccgtctctttcaaccctgctgcggcagactgccgtcttgaacaagaccgagaacatctcg
cctgtacttgcaggcgggctattcagggccatgctcaccggcgggccctatccgcaaagc
ctgttgcccgccgtgcttggacgcatccgcgccgagcacgccagaccagaagataaaagc
cgctataggcttgaagttgtgacgtattatcgagccgccttgatcaaggcgtatctcata
agaaacagaaagctggaggtgcccgtgtctctcgaccccgcaagaacagaccgcccgtac
ctgctcggacgactcttcgccgttctggaaaaagcgcaggaagatgccgtgcccggtgcg
aacgccaccatcaaggaccgctatctggcctccgcatcggccaatccggggcaggtattc
cacatgctgctcaagaatgcgtccaaccacacggccaaactccgcaaggaccctgaaaga
aaggggtcggccatccactacgaaatcatgatgcaagagattatcgacaacatcagcgat
tttccggtgaccatgtcgtccgacgaacaaggcctgttcatgatcggctactaccaccag
cgcaaggcccttttcaccaagaagaacaaggagaactag

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