Nitratidesulfovibrio vulgaris Hildenborough: DVU_0256
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Entry
DVU_0256 CDS
T00171
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
DVU_0256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
RNase_H_2
ResIII
Cas3-like_C_2
DNA_pol_B_exo2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAS94739
UniProt:
Q72FF8
LinkDB
All DBs
Position
complement(291021..294386)
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AA seq
1121 aa
AA seq
DB search
MPHPQDGLDIVDNGPVVPRRDTALSGGLASGTLVADEVVGQHPAHDDTGRSLTQGSLLEP
PSHRPPSPLQDNEANASDLVAEYIAALLASRTFGRQVRHHRVIPQREAQTAPQHRPWTRA
VQDILTRQGIADLYSHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRDPDARA
IYLFPLKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPE
MLHLALLPHHEQWASLFASLTHVVVDEVHTYRGVLGAHMAQVFRRLRRVCERYGAQPSFV
FCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDPEESPATAAIQLLRSALKRG
LRTIVYCQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLPEERRDVEARMASGQLLAVIT
TSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRARQESAVVLVAGEDALDQYFMRH
PEDFFARGAEHAVLNPDNPVILARHLECAAAEIPLSAADPWLASPGASEAVQRLEREGLL
LRSADGSTLLASRKRPQRHVDLRGSGSTYTIEDGEGHIIGSVDGHRALRETHPGAVYLHR
GRTWVVQQLDPGARKVMASPARVGWYTRVRGNKQTEILDVQDRREAWGTRVFFGRLRVTE
TVTGYEKRSASGGRLLGVTPLDLPPTVFETEGLWFEIPDAAREATERELLHFMGSIHALE
HAAIGILPLLVMTDRNDLGGISTPMHPQVGRPAVFIYDGMPGGAALSRLAFARADELFAR
TRDAIGDCPCETGCPSCVHSPKCGSGNRPIDKAGALFLLDRMAAGTPERDDGPSLHAVMP
SDGVPLLPTEEHGVHDKQPEGAPPETARDGSRPAGDRGCIMPASYDAASISPSHPDDDTR
QENTMNATYTATTPDGVSVASSAMAPPEKASPASSCTVAAERKSAPRVMVLDVETRRSAA
EVGGWHRADRMGVSIAVLHDSGDDSFTAYPQDEVPAMLHRLREADLVVGFNIVRFDYTVL
SPFAPFDLHTLPTLDMLQKVKDRLSYRVSLDNLAQATLNAPKSADGLQALRWWQEGRLDL
IAEYCRKDVELTRDLYLYGLANGYLLFTNKAGQTVRVPVEW
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatccgcaagacggtctcgatatcgtggacaacgggcctgttgtgccccgccgg
gacaccgcactctccggcggccttgcctccggtactctcgtagccgacgaggtagtcggg
cagcatccggctcatgacgacacgggcaggtctctcacgcagggttcacttctggagccc
ccatcacaccgcccgccttcccccttgcaggacaatgaggccaacgcctccgaccttgtg
gcggagtacatcgccgcgctcctcgcctcacgcaccttcgggcggcaggtgcgccatcac
cgggtcatcccccaacgcgaggcacagaccgcaccgcagcaccgcccctggacgcgcgcc
gtgcaggacatcctcacgcggcagggcatcgccgacctgtacagccatcaggcccgcgcc
accgacatcatccgtgccggaagggatgtcgtggtggcgacccccacagccagcggcaag
accttcatctacaacctgcccgtgctggaacagtttctgcgcgacccagacgcacgcgcc
atctacctctttcccctgaaggccctcgcacaggaccagctggcgaccttcaacgccctg
acagcccactggccccgcgatgcgcgccccgctgccgccatctacgacggtgacaccaca
gaccattttcgccgcaaaatccgcaatgccccgcccccggtgctgctcaccaacccggag
atgctgcaccttgccctgctgccccaccatgaacaatgggcgagccttttcgcttcgctc
acccacgtggtcgtagacgaagtgcatacctaccgcggggtgctcggggcgcacatggcg
caggtctttcgcaggctacgtcgggtatgcgaacggtacggggcgcagccctccttcgtg
ttctgttcggcaaccgtgggcaatccgggcgaacttgcgcacaatctcaccgggctgacc
ccggaggtcgtcaccgaaagcggggcaccgcagggcaagcggcacttcatattcctcgac
cccgaagaaagccccgccactgccgccatccagcttctgcgctcggcactcaagcgcggc
ctgcgcaccatcgtctactgccagtcgcggcgcatgaccgagcttgtcagcctgtgggcc
gcggagaagtcaggcccctaccgcgaccgcatcagcgcctacagggccgggttcctgccc
gaggaacggcgcgatgtcgaagcacgcatggcctcgggccagttgctggcggtcatcacc
accagcgcgcttgaactgggtatcgacatcggctcgctcgacctctgcatccttgtcggc
taccccggcacggtgatgtcgacgctgcaacgcggcggacgcgtggggcgcgcacggcag
gagtccgccgtggtgctggtggcgggcgaagacgcactcgaccagtacttcatgcgccac
cccgaggacttcttcgcacgtggcgcggaacacgccgtgctcaaccccgacaacccggtc
atcctcgcacggcatctggaatgcgccgccgccgagatacccctctccgccgccgacccg
tggcttgcctcacccggagcatcagaggcggtacagcgtcttgagcgggagggactgctt
ctgcgcagtgccgacggttcgacgcttctggcgtcacgcaaacggccgcagcggcatgtc
gacctgcgcggcagtggttcgacctatactatcgaagacggcgaagggcatatcatcggc
agcgtggacggacatcgcgccctgcgcgagacgcatcccggcgcggtgtacctgcaccgg
gggcgtacgtgggtggtgcagcagcttgaccccggcgcgcgcaaggtcatggcgagtccc
gcccgtgtgggctggtacacgcgagtgcgcggcaacaagcagacagagattctcgacgtg
caagacaggcgcgaggcttggggaacgcgcgtcttcttcggacgcctgcgtgtgaccgag
accgtgacaggctacgagaagcgcagcgccagcggtggcagactcctcggcgtgactccg
cttgacctgccgcccaccgtcttcgagaccgaagggctatggttcgagattcccgacgcg
gcgcgtgaagccaccgaacgcgaacttctgcacttcatgggttccatccatgcgctggaa
cacgccgccatcggcattctacccctgctggtgatgaccgaccgcaacgacctcgggggc
atatccacccccatgcacccgcaggtgggacgcccggcggtgttcatctacgacggcatg
cccggcggtgccgcactttcgcgacttgccttcgcgcgcgccgatgaacttttcgcccgc
acccgcgacgccatcggcgactgcccgtgcgagacgggctgcccctcgtgcgtgcactcg
cccaaatgcgggtcgggcaatcggcccatcgacaaggcgggggcactcttcctactcgac
cgcatggcagcgggaaccccggaacgcgacgacgggccaagccttcacgcggtgatgccg
tctgacggagtgcctctcttgccgacggaagaacacggcgtacacgacaagcagccagaa
ggcgcaccgcccgaaaccgcccgtgatggcagccgccctgcaggggatcgcgggtgcatc
atgcccgcttcatatgatgcagccagcatttcgccatctcacccggacgatgacacccgt
caggagaacaccatgaacgccacatatacagccacgacgccggatggggtttctgttgcg
tcatcagcaatggcgccaccggagaaggcgtcaccggcctcctcgtgcacggtagccgca
gaacggaagtctgccccccgcgtgatggtgctggacgtggagacccggcgttccgccgcc
gaggtgggcggctggcaccgggccgaccgcatgggcgtgagcatcgccgtgctgcacgac
agtggcgacgacagcttcacggcgtacccgcaggacgaggtgcccgccatgctgcaccgt
ctgcgcgaggccgaccttgtggtgggcttcaacatcgtgcgcttcgactacacggtgctg
tcacccttcgccccgttcgacctgcacaccctgccgacactcgacatgctccagaaggtg
aaagaccgcctgtcctaccgggtgtcgctggacaatctcgcacaggcgacgctgaacgcc
cccaaaagtgccgacggcttgcaggccctgcgctggtggcaagagggcaggctcgacctc
atcgccgaatactgccgcaaagacgtggaactgacccgcgacctgtacctgtacggactt
gccaacggctatctgctcttcaccaacaaggcgggacagaccgtgcgggtacccgtggag
tggtag
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