Nitratidesulfovibrio vulgaris Hildenborough: DVU_0481
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Entry
DVU_0481 CDS
T00171
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu00541
Biosynthesis of various nucleotide sugars
dvu01100
Metabolic pathways
dvu01250
Biosynthesis of nucleotide sugars
Module
dvu_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DVU_0481 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dvu01005
]
DVU_0481 (rfaD)
Enzymes [BR:
dvu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DVU_0481 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dvu01005
]
Core region
DVU_0481 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
ThiF
adh_short
Motif
Other DBs
NCBI-ProteinID:
AAS94964
UniProt:
Q72ET7
LinkDB
All DBs
Position
547103..548074
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AA seq
323 aa
AA seq
DB search
MYIVTGGAGFIGSAMVWKLNEMGIEDIVVVDNLSTSEKWKNLVNRRYVDYVHRDTFMDMV
LHGDLPWDVDAVVHMGACSATTERDADFLMENNLRYSRMLCELCMETGARFINASSAATY
GDGSLGFSDDDTTMLRLKPLNMYGYSKQLFDLWAYREGRLDGIASLKFFNVYGPNEYHKG
DMRSVICKAYAQIGQEGVMRLFRSCHPDYADGGQMRDFIYVKDCVEVMWWLLQNPGVNGV
FNVGTGKARTWNDLVTAVFRAMDREPVIEYIDMPEQLRGKYQSFTEATMGKLRDAGCPVR
FTELEDGVTEYVRRYLAAADPHL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcgtcaccggaggcgcgggtttcatcggcagtgccatggtctggaagctgaac
gagatgggcatagaggacatcgtcgtcgtcgacaacctgtccaccagcgagaagtggaag
aacctcgtcaatcgccgctatgtcgactacgtccatcgcgacaccttcatggacatggtg
ctgcatggcgacctgccgtgggatgtggatgccgtggtgcacatgggggcgtgttccgcc
accaccgaacgcgacgccgacttcctcatggagaacaacctgcgttacagccgcatgttg
tgtgaattgtgcatggagacgggcgcacgcttcatcaacgccagcagcgcggcgacctac
ggtgacggcagcctcggtttctccgacgacgataccaccatgctgcgcctcaagccgctg
aacatgtacggctactcgaagcagctgttcgacctctgggcgtaccgcgaaggcagactc
gacggcatcgccagcctgaagttcttcaacgtctacgggcccaacgaataccacaagggc
gacatgcgcagtgtcatctgcaaggcctacgcacagatagggcaggagggcgtcatgcgc
ctgttccgttcgtgccatcccgattacgccgatggcgggcagatgcgcgacttcatctac
gtgaaggattgcgtggaggtcatgtggtggctgttgcagaaccccggcgtcaacggcgtg
ttcaacgtgggcaccggcaaggcgcgcacgtggaacgacctcgtcaccgcggtgttccgc
gccatggaccgtgaaccggtcatcgagtacatcgacatgcctgaacaactgcgcggcaag
taccagtcgttcaccgaagccaccatgggcaagctgcgcgacgcgggctgcccggtacgt
ttcactgaactggaggatggcgtcaccgaatacgtgcgccggtacctcgccgcggccgac
ccccacctgtag
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