Nitratidesulfovibrio vulgaris Hildenborough: DVU_1571
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Entry
DVU_1571 CDS
T00171
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVU_1571 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvu03021
]
DVU_1571 (rho)
03019 Messenger RNA biogenesis [BR:
dvu03019
]
DVU_1571 (rho)
Transcription machinery [BR:
dvu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DVU_1571 (rho)
Messenger RNA biogenesis [BR:
dvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DVU_1571 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
Fan1_SAP
ATPase_2
AAA_14
S1CSD-TOTE-2
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AAS96049
UniProt:
Q72BR3
LinkDB
All DBs
Position
complement(1653748..1654998)
Genome browser
AA seq
416 aa
AA seq
DB search
MNLSELKIKSMQELMELAEQFKVENASGMRKQELIFALLQACASQNGAIYGDGVLEILPD
GFGFLRSPLCSYMPGPDDIYVSPSQIRRFALRKGDVVSGQIRPPKEGERYFALLKVTEIG
FEPPENAKNLVLFDNLTPIYPDRQFIMENGDKNYSSRIIDIMAPIGCGQRGLIVAPPRTG
KTMLLQTIANSINANSPDTYLIVLLIDERPEEVTDMERTVKNAEVVSSTFDEPPQRHVQV
CEMVLEKAKRLVERKRDVVILLDSITRLGRAYNAVTPSSGRVLSGGLDANALQRPKRFFG
AARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIYLDRHLSEKRVFPAIDINR
TGTRKEDLLLSDEVLNRVWILRKILAPMSSIDSMEFLLDKMRGTKSNRDFMNCMNK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttccgagctgaagatcaaaagcatgcaggagctcatggagcttgccgagcag
ttcaaggtcgaaaacgccagcggcatgcgaaagcaggagctcatattcgcccttctgcaa
gcctgcgcatcccagaatggagccatatacggcgacggggtgcttgaaatcctgcccgac
ggcttcggcttccttcgatctccgctctgcagctacatgcccggccccgacgacatctac
gtctccccctcccagattcgtcggttcgcactgcgaaaaggcgatgtcgtctccgggcag
atacgcccccccaaagagggtgaacgctatttcgcccttctcaaggtcacggaaatcggc
ttcgagccccccgaaaacgcaaagaatctcgtcctgttcgacaacctcacgcccatctac
cccgaccgccagttcatcatggagaacggggacaagaactattcgagcaggatcatcgac
atcatggcccccatcggatgcgggcaacgcggcctcatcgtggccccgccgcgcaccggc
aagaccatgctgcttcagaccatcgccaactccatcaatgccaacagccccgacacctat
ctcatcgtcctgctgattgacgagcgccccgaagaagtcaccgacatggagcgcaccgtc
aagaacgccgaagtggtgagctcgacattcgacgaaccgccacagcgccatgtgcaggtc
tgtgagatggttctcgaaaaagccaagcgccttgtcgagcgcaagcgcgacgttgtcatc
ctgctcgactccatcacccgcctcggtcgcgcctacaacgccgtcacgccctcttccggc
agggtgctttcgggcggtctcgatgccaacgcactgcaacgcccgaagcgattcttcggt
gctgcacgtaacatcgaagaaggcggcagcctcaccatcatcgccaccgccctcatcgac
accggctctcgcatggacgaggtcatcttcgaagagttcaagggaaccggcaacatggag
atctatctcgatcgccatctctccgaaaagcgcgtgttccccgccatcgacatcaaccgc
accggcacccgcaaggaagacctgcttctttccgacgaagtgctcaaccgcgtgtggata
ctgcgcaagattctcgcccccatgagttccatcgacagcatggaattccttctcgacaag
atgcgtggcaccaagagcaaccgcgatttcatgaactgcatgaacaagtag
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