Nitratidesulfovibrio vulgaris Hildenborough: DVU_1605
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Entry
DVU_1605 CDS
T00171
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVU_1605 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvu03400
]
DVU_1605 (uvrB)
DNA repair and recombination proteins [BR:
dvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVU_1605 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVU_1605 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAS96083
UniProt:
Q72BN0
LinkDB
All DBs
Position
1686795..1688828
Genome browser
AA seq
677 aa
AA seq
DB search
MADTCFRLHTEFEPTGDQPEAIGQIVANLGHGVRDQVLLGVTGSGKTFTVANVIAACNRP
ALILAPNKTLAAQLYNEFRALFPDNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSINDNI
DKLRHAATHALLTRRDVVIVASVSCIYGLGSPEYYARLVIPVECGQRFSMDALMTRLVEV
QYQRNDFDFHRGTFRVRGDVLEVIPAYHHERALRIEFFGDDIDAISEIDPLTGEVLGSVG
KTVIYPASHYVSDRDNLVRAMSDIRDELGERLREYQSANRLVEAQRLEQRTMLDLEMMEE
LGYCNGIENYSRHLDGRAAGQPPSCLLDYFPDDFLLFVDESHITVPQVGAMYKGDRSRKS
TLVDFGFRLPSALDNRPLEFAEFLTRINQTVYVSATPGKWELDRSQGVIAEQIIRPTGLV
DPVVEVRPTRGQVDDLLAECRARAARDERVLITTLTKRMAEDLTEHLGNMGLSVRYLHSD
IDTMERMAIIQALRRGECDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSTGSLIQTF
GRAARNAAGRVILYADTVTASMRAAMDETARRRERQQAWNEANGIEPRTIRKSLDTPFDA
IYSAASEGGKGKGRGRGRQAAPAVENVAEYGTSPEDMAKHIQKLEREMREAAKELEFERA
ATLRDRIRLLRERLIEA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacgtgtttcagactgcataccgaattcgaaccgacaggagaccagcccgag
gccatcgggcagattgtcgcaaacctcgggcatggggtgcgcgaccaggttctgcttggc
gtcaccgggtcgggcaagaccttcaccgtggccaatgtcatcgccgcatgtaacaggcct
gcccttatcctcgcccccaacaagacgctggcggcacaactgtacaacgagttccgcgcg
cttttccccgacaacgccgtggagtatttcgtaagctattacgactactaccagcctgaa
gcctacgttccggcctctgacacgtatatcgagaaggactcgtccatcaacgacaacatc
gacaagctgcgccacgccgccacacacgcgcttctcacgcggcgtgacgtggtcatcgtc
gcctcggtgtcgtgcatctacggtcttggttctcctgaatactacgcccgtcttgtcatc
ccggtcgagtgcggtcagcgcttctcaatggacgccctcatgacgcgccttgtggaggtg
cagtaccagcgcaacgacttcgactttcaccgtggtacgttccgtgttcgcggcgacgtg
ctagaggtcattcccgcctaccatcacgagcgcgccctgcggatagagttcttcggcgac
gacatcgacgccatcagcgagatagacccgctcaccggcgaggtgctgggcagcgtgggc
aagacggtcatttacccggcaagccactacgtgtcagaccgcgacaacctcgtgcgcgcc
atgagcgacatccgcgacgaactgggtgagcgactgcgcgagtatcagtctgcgaaccgc
cttgtggaggctcagcgccttgaacagcgcaccatgctcgaccttgagatgatggaagag
cttggctactgcaacggcatcgagaactattcgcggcatcttgacggacgcgcggcggga
cagcccccttcgtgtctgctcgactactttcccgacgatttcctgctcttcgtcgacgag
tcgcacatcaccgtgccgcaggtgggggccatgtacaagggcgaccgttcccgcaagtcc
actctggtggacttcggcttccgcctgccctcggcactggacaacaggccgctggagttc
gcagagttccttacgcgcatcaaccagacggtgtacgtctccgcaaccccgggcaagtgg
gagctcgacaggtcgcagggtgtcattgccgagcagatcatcaggcccacagggcttgtg
gaccctgtggttgaggtgcgtccgacccgcgggcaggtggacgacctgctggcggaatgc
cgtgcccgtgcggcacgcgacgagcgggttctcatcaccacgctcaccaagcgcatggcc
gaagacctcaccgaacacctcggcaacatgggactctcggtgcgctacctgcattcggac
atcgacaccatggagcgcatggccatcatacaggccttgcggcgcggcgagtgcgatgtg
ctggtgggcatcaacctgctgcgtgaaggtcttgatatccccgaagtctctctggtatcg
attctcgacgccgacaaggaaggcttcctgcgttccaccgggtcgctcatccagaccttc
ggtcgtgcggcacgtaacgccgccggaagggtcatcctctatgccgacacggtgaccgcc
tccatgcgggctgccatggatgagacggcgcgtcgccgcgaacggcagcaggcatggaac
gaggccaacggcatagagccccgcaccatccgcaagagtctcgacacccccttcgacgcc
atctacagcgcggcgtctgagggtggcaagggcaaggggcgcggaagagggcgtcaggct
gccccggcggtcgagaatgtcgccgaatacggcacctcgccagaagatatggcgaaacac
atccagaaactggagcgggaaatgcgtgaagctgccaaggagcttgaattcgagcgagcc
gcgacactgcgcgaccgcatacgcctgctgcgcgaacggctcatcgaagcgtga
DBGET
integrated database retrieval system
