Nitratidesulfovibrio vulgaris Hildenborough: DVU_1700
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Entry
DVU_1700 CDS
T00171
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVU_1700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvu03019
]
DVU_1700
Messenger RNA biogenesis [BR:
dvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DVU_1700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_3
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AAS96177
UniProt:
Q72BD6
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All DBs
Position
1774325..1775572
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AA seq
415 aa
AA seq
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MEITIHRGTQEIGGSCVQLSSGGRSILIDAGSPLRESQCEVKLSDISFEAVLVSHPHQDH
YGLIDSLDPATPVYIGEIACKMIAAARTFTSRPPLANNFRHFKAWTQFEIGPFRITPYLM
DHSSTDAFGFLVEAEGKRLFYSGDFRAHGSKEKTFDALLARPPQKVDVLLMEGTMLGRES
AAYRREKNIENEMLEVLSEEKGPAFLICSGQHVDRLCAAFRACRKAGRIYVVDIYTAWIL
QILSEHFDTTPHFRLKDIRVLAHGPTAKNHYMAIKNNAKFTRFIREIYKTDTAIKESQIA
ESPSRYFIKNTRIDHLLNALNPPQCSLIYSQWSGYLESQYNPQSWKLTNLRDDPRVSFHE
IHTSGHAFRQDLKRYANAINPKLLVPIHTEKKQDYAKHFQPIQVKAVADGELFEV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaccatccaccgtggaacgcaagaaatcggcggaagctgtgtgcagctttct
tcagggggccgatcaatattgattgatgctggctcccccctcagagaaagccaatgcgag
gtcaagctttctgatatcagctttgaagcagtgttggtgagccacccgcatcaggatcat
tacggactgatcgacagccttgatcctgccacgccggtctatattggcgaaatcgcctgt
aagatgattgccgcagccagaacctttacgtccagacctccccttgcaaacaacttcagg
catttcaaggcatggacccagtttgaaataggccctttccgtatcactccgtatctgatg
gatcattcatctaccgacgcctttggctttctggtcgaagccgaaggtaaaagacttttc
tacagcggagatttcagagcgcatggcagcaaagaaaaaacattcgatgcccttcttgca
agaccccctcaaaaggtcgatgtattgctgatggaaggcaccatgctgggccgtgaaagt
gcagcatacaggcgggaaaaaaatattgaaaacgaaatgctagaggtactgagcgaagaa
aaaggaccagcttttctgatttgttcaggacaacatgttgatcgtttgtgtgccgccttc
agagcatgtagaaaagctgggcgaatctatgtcgttgacatctatacagcctggattctg
caaattctatccgagcacttcgacacgacacctcacttccgcctgaaagacatccgcgta
ttggcgcatggccccaccgcaaaaaaccactacatggccatcaagaacaacgcaaagttc
acaagattcatacgggaaatctacaaaaccgatacggccattaaagagtctcaaatcgcc
gaatccccaagccgctatttcatcaaaaatactcggattgatcatttgctgaatgcgcta
aatccaccacagtgcagtctcatatattcacaatggagtggatatcttgaaagccaatac
aaccctcaaagctggaaactgacgaatctcagagatgacccgagagtctcattccatgaa
atccacaccagtggacatgctttccggcaagaccttaagcgttatgccaacgcaattaac
ccaaagcttctggtgccgattcatacagaaaaaaaacaagactatgcaaagcacttccag
cccattcaggtgaaggccgttgcagacggcgagttgtttgaagtttga
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