Nitratidesulfovibrio vulgaris Hildenborough: DVU_1867
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Entry
DVU_1867 CDS
T00171
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu00300
Lysine biosynthesis
dvu00470
D-Amino acid metabolism
dvu01100
Metabolic pathways
dvu01110
Biosynthesis of secondary metabolites
dvu01120
Microbial metabolism in diverse environments
dvu01230
Biosynthesis of amino acids
Module
dvu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DVU_1867 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DVU_1867 (dapF)
Enzymes [BR:
dvu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DVU_1867 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
AAS96343
UniProt:
Q72AX3
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All DBs
Position
1932520..1933368
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AA seq
282 aa
AA seq
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MSGKKATVPFHKLHGCGNDFVFIDNRHLKLSVEAMPDWARSICRRAFGVGADGLVFLDTA
PQGHEADYIWHFYNADGSRAEMCGNASRCAAVLAVDLGFAGPRHAFGTDAGIVHAVADVE
AGYAKVELTRPRDLAAGTTLELEGTPFTVHFVNTGVPHAVVFSDSVDGLDLRRLGAALRY
HPHFSPAGTNANFASIIDRRTIHLRTYERGVEDETYACGTGAAATAFIAHTLGLTDASVG
VRTSGGEVLGIDIEDGSIFLSGKAVRVFSGEMHPEGLGLTLP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaagaaggccactgtgcccttccacaagctgcacggctgcggcaacgatttc
gtcttcatcgacaaccgccacctcaaactgtccgtcgaagccatgcccgactgggcccgc
agtatctgccgacgcgccttcggcgtgggggccgacggactcgtctttctcgataccgca
ccgcaagggcatgaagccgactacatctggcatttctacaatgccgacggctcccgtgcc
gagatgtgcggcaacgcctcgcgctgtgccgccgtccttgccgtcgatctaggctttgcc
ggaccgcgccacgccttcggcaccgatgccggcatcgtgcacgccgtcgccgatgtcgaa
gccggatacgccaaggttgaactcacccggccgcgcgacctcgcagcggggacgactctc
gaactggaagggacgccgttcacagtgcatttcgtcaacaccggcgtcccgcatgccgta
gtgttctccgactccgtggatggcctcgacctgcgcaggcttggtgctgccctgcgctat
cacccccacttctcacccgcaggcaccaacgccaacttcgcctccatcatagaccgccgc
accattcatctgcgcacctacgaacgcggcgtcgaagacgagacctacgcctgcggaacg
ggtgccgcagccacggctttcatcgcccatacgctgggattgactgatgccagcgtgggt
gtaagaacgtcaggaggcgaagtgcttggcatcgacatcgaagatggttccattttcctc
tccggcaaggcggtcagggtgttctcgggcgagatgcaccctgaagggctggggctgacg
ctgccctag
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