Nitratidesulfovibrio vulgaris Hildenborough: DVU_2210
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Entry
DVU_2210 CDS
T00171
Name
(GenBank) TPR domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvu03009
]
DVU_2210
Ribosome biogenesis [BR:
dvu03009
]
Prokaryotic type
ribosomal protein modification factors
DVU_2210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_1
TPR_2
TPR_8
TPR_12
TPR_16
TPR_19
TPR_6
TPR_14
TPR_9
T7SS_EccA1_N
TPR_CcmH_CycH
Motif
Other DBs
NCBI-ProteinID:
AAS96683
UniProt:
Q729Y7
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Position
2305040..2306767
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AA seq
575 aa
AA seq
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MIQLRPCPKSYTRDQDKATTPAETVRRVRERLASLDISILAETRRVDVGRLGIPVFLSVC
GADARAVMPTRKQMGKGASLEQAQASALMELMERYSFFTFWRDMPGMVEATWSEARNRFG
DALIPVDEILHSVHDTLSPDDAVRALDLWRWKFFPATDITHGREVWLPLDWFKKLGEFNG
SSAGNTEEESILQGSCELVERHVCCLIDRTQPELPTIDPASLDDPVLLELAAAFERNGIR
LVLKDFSMGMPVPTVGAIAWDPATFPERSEIVYTAGTSSSPVKAAIRAVTEVAQLAGDFC
TGACYEASGLSKYESLDDIAWLVAGPVVALDTLPSVETDDIRDELAALCDGLAATGHTLY
SVSTMNPDVGVNTHYNIVPGFHFRERDRNASLGLFIGRILSEEADAGTALAGLSVLEELY
PGAHFLPFFKGMLALRAESHHEAISFFEQAEPLQPEADSRGLAAFYGAYVRTLLTDWQGA
LPGLDRAVTECPEMKEYFNLRGVCHFKLGDYAQAAQNFAQVLHIDKGAVVDLANLGLCHK
FMGDTEKAEELLSAALEIDPGLDFARRHLDEMRQP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatacagcttcgcccctgccccaagagctacacacgcgaccaggacaaggcgaccacc
ccggcagagaccgtacgccgggtgcgcgaacgcctcgcctcgctcgacatcagcatactc
gccgagacgcgccgggtggatgtgggacgcctcggcatccccgtctttctcagcgtgtgc
ggcgccgatgcccgtgccgtgatgcccacgcgcaagcagatgggcaagggtgcctcgctg
gaacaggcgcaggcatctgcgctcatggagttgatggagcgttacagcttcttcaccttc
tggcgagacatgcccggcatggtggaggccacatggtccgaagcccgaaaccgtttcggc
gacgcgctgatacccgtcgatgagattctgcactccgtgcatgacaccctttcccccgac
gacgccgtccgcgccctcgacctgtggcgctggaagttcttccccgccacggacatcacc
cacgggcgcgaggtatggctgcccctcgactggttcaagaagcttggtgagttcaacggc
tcatcggcaggcaacaccgaagaggagtccatccttcaaggcagttgcgaacttgtggaa
cgccacgtgtgctgcctcatcgaccgcacacagcccgagttgcccaccatcgacccggcg
tccctcgacgaccctgtgctgcttgaacttgcggctgccttcgagcgcaacggcatccgg
ctggtgctcaaggacttctccatggggatgcccgtgcctacggtcggggccatcgcatgg
gaccctgccaccttccccgaacgctccgaaatcgtctacacggcaggcacgtcatcctct
ccggtgaaggcagccatacgcgccgtgacagaggtcgcacagcttgcgggcgacttctgc
accggggcctgctacgaggcctcggggctttccaaatacgaaagcctcgacgacatcgcg
tggcttgtcgccggacccgttgtcgcccttgacaccctgccttcggtggagaccgacgac
atccgcgacgaacttgccgcgctctgcgacgggcttgccgcgacggggcacacgctctac
agcgtgtccaccatgaaccccgatgtcggcgtcaacactcattacaacatcgtgcccggg
ttccacttccgtgaacgcgaccgtaacgcctcactggggctgttcatcgggcgcatcctg
agtgaagaggcagacgccggcacggcgctggcggggctctcggttctggaggagctctac
cccggtgcgcatttcctgcccttcttcaaggggatgctggcactcagggccgagtcgcac
cacgaggccatcagcttcttcgaacaggccgaaccgctgcagcctgaagcggactctcgc
ggtctggcggccttctacggtgcctatgtgcgtaccctgctcacagactggcaaggggcc
cttcccgggctggaccgtgccgtgaccgaatgccccgagatgaaagagtacttcaacctg
cgcggggtgtgccatttcaagcttggcgactacgcacaggccgcacagaacttcgcgcag
gtactgcatatcgacaagggggccgtggtcgacctcgccaatctcggcctgtgccacaag
ttcatgggtgacaccgagaaggccgaagagcttctctccgccgcactggagatagacccc
ggcctcgacttcgcacgccgccatctggatgagatgcgccagccctga
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