Nitratidesulfovibrio vulgaris Hildenborough: DVU_2506
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Entry
DVU_2506 CDS
T00171
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dvu
Nitratidesulfovibrio vulgaris Hildenborough
Pathway
dvu00470
D-Amino acid metabolism
dvu00550
Peptidoglycan biosynthesis
dvu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dvu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DVU_2506 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DVU_2506 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvu01011
]
DVU_2506 (murD)
Enzymes [BR:
dvu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DVU_2506 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dvu01011
]
Precursor biosynthesis
Amino acid ligase
DVU_2506 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
FAD_binding_3
NAD_binding_8
NmrA
Pyr_redox
Thi4
YjeF_N
Pyr_redox_3
AdoHcyase_NAD
AlaDh_PNT_C
Pyr_redox_2
F420_oxidored
DAO
Motif
Other DBs
NCBI-ProteinID:
AAS96978
UniProt:
Q728U6
LinkDB
All DBs
Position
complement(2617887..2619188)
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AA seq
433 aa
AA seq
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MTCDKEKTRGIRPGDIAVVVGTGRSGVAAARLLHAKGARVRVLERDAANVPATFAEWAAG
AGVEIVCGAHDAAHFADAAVVVPSPGVAVATLRPYLPATGGPEVMAEMELAWRELSGEPV
IAVTGTSGKTTTVSLCAHMLRTQGLSVFLGGNIGTPLCEYVLEGKRADVLVIEISSFQLQ
TCSTFRPRVAMLLNITANHLDYHADMQEYIDAKFRLFRCQDEDDLAVFGEGLAPLVDRYG
VKARRVTFRATDRFAESRLFGAHNRANAEAAWTAAREFGVTLENALQAVATFAPMPHRLE
QVAERGGVLYVNDSKCTTVSALRVALEAFDRPVLLLAGGKFKGGDLEGLIPLVRERVRAV
MLFGASREVFEAAWRDVVPMTWDATLEEAVRRAASAARQGEVVLMAPATASFDLFRNYGH
RGDVFRAAVESLA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcgacaaggaaaagaccagaggtatcaggccgggtgacatcgccgtggtggtc
ggcaccgggcgttcgggcgtcgctgcggcgcgtctccttcatgccaagggcgcgcgggtg
cgcgtactcgagcgcgatgccgccaacgtgcccgccacctttgcggagtgggccgccggc
gcgggtgtcgaaatcgtctgcggggcccatgacgccgcgcatttcgcggatgccgccgtt
gtcgtgcccagccccggcgtggctgtcgcgacattgcgaccctatctgccagccacggga
ggcccggaggtcatggcggagatggaactcgcatggcgtgaactctcgggtgagcccgtc
atcgccgtcaccggcaccagtggcaagaccaccacggtcagtctttgcgcccacatgctg
cgtacgcaggggctgtcggtattcctcggcggcaatatcggcacgccgttgtgcgagtac
gtgcttgagggcaagcgggcagacgtgctggtgatcgagatttcgagtttccagttgcag
acctgttcgaccttcaggccacgggtcgccatgcttctcaacatcacggcgaaccacctc
gactaccacgccgacatgcaggaatacatcgatgccaagttcagactcttccgttgtcag
gacgaggacgaccttgctgtgttcggcgaggggcttgccccgctggtggacagatacggc
gtgaaggcccggcgcgtgacgttccgggctaccgacaggttcgcagagagtcgtctcttc
ggggcccacaaccgtgccaacgcggaagcggcatggacggcggcgcgcgaattcggggtc
accctcgagaatgcgcttcaggctgtcgccaccttcgcgcctatgccccatcggctggaa
caggtcgcggaacgtggcggcgtgctctatgtgaacgactcgaagtgcaccaccgtctcg
gcccttcgtgtagcgctggaggccttcgaccgcccggtgctgctgcttgccggaggcaag
ttcaagggcggggaccttgaagggctgataccgctggtgcgtgagagggtcagggccgtg
atgctcttcggcgcaagccgggaagtgttcgaggccgcgtggagggacgtcgtacccatg
acgtgggacgccacccttgaagaggccgtgcgccgcgccgcctctgctgccaggcagggc
gaggtggttctcatggcgcccgccaccgcaagtttcgaccttttccgcaactacgggcac
aggggcgacgtcttccgtgccgcagtggagtcgcttgcatga
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