Diabrotica virgifera virgifera (western corn rootworm): 114324317
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Entry
114324317 CDS
T09922
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114324317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
114324317
Membrane trafficking [BR:
dvv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114324317
Protein recycling
Other Rab GTPase associated proteins
114324317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
DUF1289
Motif
Other DBs
NCBI-GeneID:
114324317
NCBI-ProteinID:
XP_028127922
UniProt:
A0A6P7EZA5
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All DBs
Position
9:23485547..23602721
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AA seq
712 aa
AA seq
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MPVLTLQRSYKYIMYATKQPSLRIKQADLKCKSGCGFYGNADWNGYCSACYRNHMDIERQ
KKTTDQSRSQVPGFSKFEEKKRQQTDKKNKYLKSLPVFRKSSNVKDAGRPEKYIDIMRQT
NPDANKLMVEFISMYSQWGELVRKDFFKFSQVFSNKIVNELDVKPIEELAEIAQNHYNLY
HNRVNSNVIYQDVPSEVREKLVEFFEKYSMISLYSFLFCPPTTNDEEKDLIIQDRIRKLS
WVNAHHLDCCISETSIEVRDLVYTAINDLLGMDSMKAPQEKLACVVKCCRSVVEVLQHCQ
GGPVSADEFLPALIFVVLKANPARLKSNILYVTRFCKDSRLMQGEAGYYFTNLCCAVSFI
ENLTAESLNMPQQEFEAYMSGELTGVSAWESALVACEGMHQLCEHLSLLKGLSERTTTVQ
NTTQKLREDMQRLKEEICENVVAVLARTPMIIKPRKTPLTLTTLTREKLKPTSSSAITSS
ISQKETQPEEDLNLQKNYYLQNLSLSQINALDSTRNKLQLDITPCITLPSSTNLTKKTYS
NELLLQSPAQDKSFESITPDDNSYLGLSKVNYDIDFSDLSTENSMAEDLTPDKRKSPTPG
YVSSDPFSPVGLSCPITQSPLIPSNVSFSQIEPKIMKTDSFVLPFLEEAKSEESLLDKLE
ETSSVNLPPPIKPTTSEYSGFSKQGSKIPSIPCNTGDFSSLNISGGPSKSSS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttaacattacagaggtcgtacaaatacatcatgtacgcaaccaagcagcca
tccttgaggatcaagcaggctgatttgaagtgtaagagcggatgtggattttatggaaat
gcagactggaacggatactgttcagcatgttaccgaaaccatatggatatcgagcgacag
aagaaaacaacagaccagtccagatcgcaagtgcccgggttctcaaagttcgaagagaaa
aagagacaacaaacagataagaagaacaagtatctgaagagcttacctgtctttagaaag
tcgtcaaatgtaaaagatgctggaagacctgaaaaatacatcgacatcatgaggcagacc
aacccggacgccaacaaattgatggttgaattcatatcaatgtacagccaatggggcgag
ctagtcagaaaagacttcttcaaatttagccaagtgttttccaacaaaatagtaaacgaa
ctggacgtcaagcccattgaagagttagcggaaatcgcacagaatcactacaatttgtat
cacaaccgcgtcaattctaacgtcatttaccaagatgtgcccagtgaggttagagagaag
ttggttgagttttttgagaagtacagcatgatcagtctatacagtttcctgttctgccca
ccaaccacaaacgacgaggagaaagaccttatcatacaagacagaatccgcaaactcagt
tgggtaaacgcccaccatctcgattgctgcataagtgaaactagcatcgaagtacgcgac
ttggtctacactgccatcaacgacctcctcggcatggactcaatgaaagctccgcaggaa
aaactggcttgcgttgtcaaatgctgtcgcagcgtcgtggaggtcctgcagcattgccaa
ggaggacccgtgagcgccgatgagttcctgcctgcgttgatttttgttgttctgaaagct
aatccagctcgattgaagagtaacatattgtatgttacgaggttttgtaaagattcccgg
ttgatgcagggagaagctggatactactttactaatttgtgttgtgccgtatcgttcata
gaaaacctcacagcggaatcactcaacatgccccaacaagaattcgaagcctacatgtca
ggagagttgactggcgtaagtgcctgggaatcggccttagtagcctgcgagggaatgcat
caattgtgcgaacacctctcgctgctgaagggactttccgaaagaactacgaccgtacag
aataccacccagaaacttagagaagacatgcaacgattaaaggaagaaatctgcgaaaat
gttgtagctgtacttgcacgaacgccgatgatcatcaaaccgagaaaaactccactaaca
ttgacaacattaaccagagaaaagctgaaacctacatcttcgtccgcaataacatcgtcc
atatcacagaaggaaactcaacctgaagaagatttaaacctacagaaaaactactaccta
caaaatttatctcttagtcaaataaatgctttagatagtactagaaataagttgcagcta
gatatcacaccttgtataacattaccaagtagtactaatctgacaaagaagacctactct
aatgagttattattacagtctccagcacaagataaaagtttcgagagcataactcctgat
gacaacagctaccttggattatcaaaagttaactatgatatagatttctcagatttgagc
acagaaaatagtatggcagaagatttaactcctgacaaaagaaaatctcctactccaggt
tatgttagctcagatccattcagccctgttggtttatcttgtcctatcactcaaagccct
ttgataccttccaacgtgtcgttttctcaaatagagccaaagataatgaagacggatagc
tttgttttaccatttttagaagaagccaaaagtgaggagtcgttgttggataaactggaa
gaaacttcatcagttaatttaccacctcccattaaaccaactacttctgaatattctggt
ttttcgaaacaaggctcaaagataccaagcataccctgcaatacaggagacttcagttcg
ttaaatatttcaggtggtccatctaaaagttcatcttaa
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