Diabrotica virgifera virgifera (western corn rootworm): 114324329
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Entry
114324329 CDS
T09922
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03015
mRNA surveillance pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114324329
09123 Folding, sorting and degradation
03018 RNA degradation
114324329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114324329
03041 Spliceosome [BR:
dvv03041
]
114324329
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114324329
mRNA cycle factors
Stress granule specific factors
114324329
Spliceosome [BR:
dvv03041
]
Complex C
Other components
Complex C specific factors
114324329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
POP1_C
TetR_C_17
Motif
Other DBs
NCBI-GeneID:
114324329
NCBI-ProteinID:
XP_028127935
UniProt:
A0A6P7F351
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All DBs
Position
5:168929028..168931093
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AA seq
621 aa
AA seq
DB search
MNPAAPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQ
QPADAERALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFS
AFGNILSCKVAQDENSSSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPHKER
EKELGEKAKLFTNVYVKNFGEDFAEEQLKVMFEKYGKITSYKIMSKEDGKSKGFGFVAFE
SSEAAEAAVEALNGKELVEGKPLYVGRAQKRAERQQELKRRFEALKMERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLTSQYMQRMANMRMHQMGQFIQPGASSGYFVPTIPAAQRFY
GPAQMTQIRASTRWAAQTTVRQGAQGGTTVYPGMQNTYRATARPPNQSTTMRSNMSVPRQ
ITGQQPQNAIVPAAVNRTANFKYTSNMRNPPQPLGGLPGAAAPVQQAVHIQGQEPLTATM
LAAAPPQEQKQMLGERLFPLIQRMYPDMAGKITGMLLEIDNTELLHMLEQQESLKNKVEE
AVAVLQAHQAKQAATTQIKKE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggctgccccaaattatcctatggcgtctttatacgtcggcgatttacattct
gatattactgaggccatgctttttgagaaattttcaaccgcgggtcctgtgctttcgatt
cgcgtgtgtagagacttgattacacgtcgatccttgggttatgcatatgtgaacttccaa
caacctgcagatgctgagcgtgctttggataccatgaattttgacttgataaaaggtagg
cctatccgcatcatgtggtctcaacgtgatccatcattgagaaaatctggcgttggaaat
gtttttatcaagaatttagatcgttccattgacaacaaggccatgtacgatactttctca
gcttttggtaacattcttagttgtaaggtagcccaagatgaaaacagctctagtaaaggt
tatgggtttgtccattttgaaaccgaagaagctgcaaataagtctattgaaaaggtaaat
ggtatgttgttgaacggaaaaaaagtatatgtaggtcgctttattccacacaaagaaaga
gaaaaggaactgggagaaaaagccaagctgttcacaaatgtttatgttaaaaattttggt
gaagattttgctgaggaacagttaaaggttatgtttgaaaagtatggtaaaattaccagc
tacaagataatgagtaaagaagatggtaaatcaaaaggatttggttttgtagcctttgaa
agttcagaggcagcagaagcggcagttgaagctttaaatggaaaagagttggttgaagga
aaacctttgtatgttggaagagcccaaaagagagctgagcgtcaacaagaactaaaacgt
cgctttgaagccttaaaaatggaaagacttaatcgctatcagggtgtaaatctctatgtt
aaaaatctagatgatacaatagatgatgaacgtctccgtaaagagtttactccttttgga
accataacatctgccaaagtgatgttggaagaaggtagaagcaagggttttggttttgta
tgtttttcctctccagaagaagctacaaaggcggtaacagaaatgaatggcagaattgtt
ggttctaagcctttatatgttgccttagctcagcgtaaagaagatcgtaaagcacattta
acttctcagtacatgcagcgtatggcaaatatgagaatgcaccagatgggtcagttcata
caaccaggtgcatctagcggttattttgttcctaccattcctgccgcacaaagattctat
ggaccagcacagatgactcaaattcgtgctagtaccagatgggccgcccaaacaactgta
agacagggtgctcaaggaggaactactgtataccccggtatgcaaaacacttacagagct
actgcccgcccaccaaatcagtcaacaaccatgcgtagcaacatgagtgtacctaggcaa
attactggacaacaaccacaaaatgcaattgtacctgctgctgttaacagaacagccaac
ttcaaatacacttcaaacatgagaaatccaccacaacctttgggaggtttaccaggtgct
gctgctccagtacagcaggctgtacacattcaaggtcaggaaccattgacagcaaccatg
ttggctgctgctccaccacaggagcaaaaacagatgttgggtgaaagattgtttccactt
atccaacgcatgtatccagacatggcaggtaaaatcactggtatgttattggagattgac
aacactgagctgctacacatgttggaacaacaggagtcccttaagaacaaagtggaagaa
gcagttgctgttttacaagcccatcaagccaagcaagctgctactactcagattaagaaa
gagtag
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