Diabrotica virgifera virgifera (western corn rootworm): 114324527
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Entry
114324527 CDS
T09922
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114324527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114324527
03041 Spliceosome [BR:
dvv03041
]
114324527
03036 Chromosome and associated proteins [BR:
dvv03036
]
114324527
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114324527
Spliceosome [BR:
dvv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114324527
Complex B
114324527
Complex C
U2 SnRNP specific factors
114324527
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
114324527
TFTC complex
114324527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
114324527
NCBI-ProteinID:
XP_028128188
UniProt:
A0A6P7F2R9
LinkDB
All DBs
Position
6:complement(43196290..43231721)
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AA seq
1218 aa
AA seq
DB search
MFLYNLTLQRGTTISHAIHGNFSGSKIQEIVISRGKILELLRPDPNTGKVHTLLTIEIFG
IIRSLMPFRLTGGTKDYVIVGSDSGRLVILEYNQQKNVFEKVHQETFGKSGGRRIVPGQY
LATDLRGRAVMIGAIEKQKLAYILNRDAQARLTISSPLEAHKSNTLVYHMVGVDVGYDNP
IFACLEIDYEEADSDPTGEAAQKTQQTLTFYEIDLVVNHVVRKYSEPLEEHANFLVTVPG
GDDGPSGVLICSENYLTYKNLGEQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDDDMVTEIKLKYFDTVPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRPLRNLVLVDELESLSPILSSRVADLAGEDT
PQLYMLCGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDDFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTAPTLCCSALSDDALVQVYPDGIRHICADKRVNEWKAGK
KSIVKCAVNQRQVVIALSGGELVYFEMDHTGQLDEFKERKRMNSDVLCMALANVPPGEQR
SWFLAVGLADGTVRIISLDPSDRLAPRAMQPLPVCAESLCIVEMGCTERDPDNAAAASTT
STLYLNIGLQNGTLLRTVLDPVTGDLTDTRTRYLGSRPVKLFRIRMQQSEAVLAMSSRSW
LSYYYQNRFYLTPLSYESLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFLIHPESSNLMILETEHNAYTEETKKQRRLQMAEEMREAAGEDEQELAKEMAE
AFLNEDLPESIFSAPKAGHGMWASTLRVMDPVQGTTYNLIRLEQNEAAMSLALLKFHGQP
EHQWFLILGIAKDLQLIPRQCNMGYLDTYKVDPSGKEFELIHRTLVDEVPNALCGYNGRL
LVGVGKMLRLYDLGKKKLLRKCENKHIPNTIVNIQAIGKRIFVSDVQESVFMVRYKRAEN
QLIIFADDTHPRWITCTSVLDYDTIATADKFGNIAILRLPSNVSDDVEEDPTGHKALWDR
GLLNGASQKADTITAFHIGETVTWLQKATLIPGGHESLIYTTLSGTVGALVPFTSHEDHE
FFQHLEMHMRSENPPLCGRDHLSFRSYYFPVKNVIDGDMCEQYNSMEPTKQKFVASELDR
TPAEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtacaacttaaccctgcaaaggggtactactatttcccatgcaattcatggt
aatttctcgggttccaaaatacaagagattgtaatttcaagaggaaaaatcttagaactg
cttagaccggatcccaacactggaaaagtgcatacactcttaaccatagagatctttggt
atcattagatctttgatgccctttaggttaactggtggaactaaggactatgtaatagta
ggttcagactctggaagattggtgattctagagtataatcaacagaaaaatgtttttgaa
aaggtccatcaagaaacttttggaaaatcaggaggtaggcgtattgtcccaggtcaatat
ctggctacagatttaagagggagagctgtaatgattggagctatagaaaaacaaaaatta
gcttatattttgaatagagatgctcaagcaaggttgactatatcatcaccactcgaagca
cataaaagtaacacattagtttaccatatggtaggtgtagatgttggttatgacaatcca
atttttgcttgtttagaaatagactatgaagaagctgatagtgatcccacaggtgaggct
gcacaaaaaacacagcaaacactaaccttttatgaaattgatttggttgtaaaccatgtg
gtaagaaaatactctgaaccattagaagaacatgctaacttcttggtaacggtacctggt
ggagatgatggaccttctggagttctaatttgttcagaaaactatttgacctacaaaaac
ttgggagaacagcatgatattcgttgtcccatacctcgtagaaggaatgatttagatgat
cctgaaagaggaatgatatttgtttgttcagctactcacaaaacaaaatcgatgttcttt
ttcttggctcaaactgaacaaggagatatttttaagataacattagagactgatgatgat
atggtaactgaaataaagttaaaatactttgatacagttcctgtagccactgctatgtgt
gtattgaagactggtttcttatttgtagcatcagagtttggcaaccattacctctaccaa
attgctcatcttggtgatgatgatgatgaattggaattcagttcagctatgcctttggaa
gaaggtgacacatttttctttgctcccagacctttaagaaatttggtcttagttgatgaa
ctggaatcactttctccaattctctcatccagagtcgctgatttggctggtgaagatacc
ccacagttgtacatgttgtgtggacggggccctagatcatctatgagagtattgagacac
ggtttggaggtttcagaaatggctgtatctgagttacctggtaatccaaatgctgtatgg
acggtgaagagaagaagtgatgatgactttgatgcctatatcattgtttctttcgttaat
gccacattggtattatctattggtgaaacggtggaagaagttacagacagtggttttctg
ggtactgcaccaaccctatgctgttctgcattaagtgacgatgctctagtacaagtatat
cccgatggaattaggcatatttgtgcagacaaacgtgtaaatgaatggaaagctggtaaa
aagagcatcgtaaaatgtgccgttaatcaaagacaagtagttattgccttgtcaggagga
gaattagtctactttgagatggaccatactggtcaattggatgagttcaaagaacggaag
cgtatgaattctgatgtcctgtgcatggctctagcaaatgtaccaccaggtgaacaaaga
tcttggtttttagctgtaggccttgctgacggaactgtcagaataatttccttggacccc
agtgatcgcttggctcctagagcaatgcaaccgctaccagtatgtgctgaatcactttgt
atagtagaaatgggttgtactgagagagatccggataatgcagctgcagcaagtaccact
agcaccctttatttgaatattggcttacaaaatggtactttgttgagaactgtgttggat
ccagttactggagatcttactgacactaggactagatatttgggttctagacctgtgaaa
ctatttagaataagaatgcagcagtctgaagcagtattagctatgagcagtagatcttgg
ttaagttactactaccaaaatcgcttttatctcacaccattatcatatgaaagtttagaa
tatgcctcgggattcagttcagaacagtgcccggaaggtatcgtcgccatttctacaaac
actttgaggattttagcattggaaaaattgggtgcagtttttaatcaggtatcatttcct
ttggagtacactcctagaaagtttctaatccatccagaatccagtaacttaatgatccta
gaaactgaacacaacgcttacactgaagaaacaaagaaacaacgccgtttacagatggcc
gaagaaatgagagaagctgcaggtgaagatgagcaagagcttgccaaagaaatggctgaa
gcgtttttaaatgaagatctaccagaaagtatattctcagcacctaaagctggccatggt
atgtgggcatcaaccttacgggttatggatcctgttcagggtaccacttacaatttgatc
agattagaacagaacgaagctgcaatgtctttagcgttgctaaagttccatggtcagcct
gaacatcagtggttcctgattcttggtattgccaaagaccttcaattaataccaagacag
tgtaatatgggatatttggacacatacaaggtggatccttcaggaaaagagtttgaattg
atacataggacactagtcgatgaggttccaaatgctctttgtggttataatggaaggttg
ttggttggtgtcggaaagatgttgagattatatgatttgggaaaaaagaaattgttgaga
aaatgtgaaaacaaacatatcccgaacaccatcgttaatattcaagctataggcaaaagg
attttcgtttccgatgttcaagaatctgtttttatggtccggtataagagagcagaaaat
caattgataatatttgcagatgatacacatcctcgatggattacatgtacttcagttttg
gattatgatactattgccaccgcagataagtttggtaacattgcaattcttcgcttgcct
tcaaatgtaagcgacgatgtcgaggaagatcctacaggacacaaagctctttgggatagg
ggtcttctgaatggggcgtcccaaaaggcagatacaattacagctttccacattggggag
actgttacttggttgcagaaagctacacttatacctggaggacacgagtcattaatttat
actactttgtctggaactgtaggagcgttagtcccattcacttctcatgaagatcacgag
tttttccaacatttggaaatgcatatgaggagcgagaatccaccattatgcggaagagat
cacctatcctttaggagttactacttccctgtcaagaacgtcatagacggagacatgtgt
gaacagtataactctatggaacctacaaaacaaaagttcgtagcttcagaattggataga
accccagctgaggtatctaagaagctagaagatattagaacacgttacgcgttctag
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