Diabrotica virgifera virgifera (western corn rootworm): 114324531
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Entry
114324531 CDS
T09922
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114324531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114324531
03036 Chromosome and associated proteins [BR:
dvv03036
]
114324531
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114324531
Coactivators
SAGA/TFTC/STAGA complex
114324531
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114324531
STAGA complex
114324531
TFTC complex
114324531
SAGA complex
114324531
SLIK complex
114324531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
WDR54
Beta-prop_WDR75_2nd
DUF7037
Motif
Other DBs
NCBI-GeneID:
114324531
NCBI-ProteinID:
XP_028128196
UniProt:
A0A6P7EYX8
LinkDB
All DBs
Position
3:9478337..9502962
Genome browser
AA seq
649 aa
AA seq
DB search
MDKTQLSAVLQVLKKYNLKGTEEILRKEANFTEVADDLGHDSDVNSVLTGYKSDGDPEAY
EAAYTDLKRFVESSLDIYKHELGSILFPVLVHMYLELIYNDHSNKAMELMKKFGPEQDYY
YHDDLKKLAMIMKKEHMTGNEIAETFKSNQFVIRISRDTLSLLKRHLNEKKSLILLNIIQ
DHLYFDMYEGVARNKSQIDSTAGSMGGEISRHNKTKVYYGIPKGPDPVTIAAPIEDEEEG
ADQDNPDKPKKKKAKKDPMFSKKTKSDPNAPPPDRIPAPEWKDNDRTEKFKANREASKRV
TLGSELLPSCCCYTLLNANYTVCCAEITEDSSMLAVGFNDSIVKVWTLVPQKLKSMKNAE
QLEEVNIEAEDVLVRMMDERSGETSRTLCGHGGPVYSVSFSPDRTLLLSCSEDTTIRLWS
LQIWTCLVVYKGHMFPVWDVKFSPLGYYFASASYDRTARLWATDHYQPLRMFAGHFSDVD
CIQFHPNSNYVATGSSDRRVCLWDCTTGNHVRIMTGHKSPIYSLAFSICGRYLASGGADC
KVLIWDLAHGHLVAEMVGHEKTIHCMSFSRCGNILVSGGLDCTLKIWDFSKLIEETNSEE
LNVSHNPDVKTGESYLLRSFATKNSPLINLHFTRRNLLISVAIFDGVHT
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacccaattgtcggcggttctacaagttcttaaaaagtacaatttaaagggt
actgaagagatacttagaaaagaagcgaattttactgaagttgctgatgatttaggacac
gattcggacgttaatagtgtcttaacggggtataagagcgatggagacccagaagcatat
gaagcagcttatacagacctgaaaagatttgttgaaagttcccttgatatctataaacac
gaattgggatctattctgtttccagttttggtacacatgtatttagaattaatctacaat
gatcactctaataaagcaatggaattgatgaagaaatttggaccggaacaggattattat
taccacgatgatcttaaaaagctagcgatgataatgaaaaaggagcatatgactggaaat
gaaatcgcagagacttttaagtccaaccagtttgttataaggatttctagagacacttta
tctcttttaaagaggcatttaaatgagaaaaaatcgttgattttattaaacataatacag
gatcatttatattttgatatgtacgagggcgttgctagaaataaaagccaaattgattct
actgcagggtctatgggtggtgaaatatctagacataataaaaccaaagtgtactatggg
attccaaagggtccagatccagtaacaatcgcagcacctattgaagatgaggaagagggt
gctgatcaagacaatccagataaaccaaaaaagaaaaaagcaaaaaaagatcctatgttt
tccaaaaagaccaaatctgatcccaatgctccaccaccagatagaataccagctccagaa
tggaaggacaacgatagaacagaaaaatttaaagcaaatcgagaggcttcaaaaagagtt
actttaggatcagaattactaccttcctgttgttgttatactttgttaaatgccaattat
acagtttgttgtgcagaaatcaccgaagactctagtatgctagctgtaggttttaatgat
tccatagtaaaagtatggactttggtgcctcagaaactaaaatctatgaagaacgctgaa
caattagaagaagttaatatcgaagccgaagatgtattggtgagaatgatggacgagcgt
tcaggggaaacctcccgcaccctctgcggccacggtggtccagtatactcagtttctttc
tctcctgatcgaacccttttgttgagctgttcagaagacaccaccattcggttgtggagt
ctccaaatatggacttgtttggtcgtgtataagggacacatgtttcccgtatgggatgtg
aagttttcaccactaggatattactttgcttcagcgtcgtacgataggactgctaggttg
tgggctacagaccactatcaacctttaaggatgtttgccggacatttttccgatgtagat
tgcattcaattccatcctaactccaactacgtagcgactggctcgagcgaccgtagagtc
tgtctttgggactgcaccaccggcaatcacgtccgtataatgacgggccataagtctccg
atttattctctagccttcagtatttgcggcaggtatttggcttccggaggagccgattgt
aaagtccttatatgggatttggctcatggacatttggtggctgagatggttggacacgag
aagaccattcattgtatgtcgtttagtaggtgtggcaatattttggtctcaggtggatta
gattgtacactgaagatttgggactttagcaagctcatcgaggaaaccaattccgaagaa
ttgaatgtttcgcataacccagacgttaagacaggggaatcttatcttttaagaagcttc
gcgaccaaaaattcgcccttgattaatttgcattttaccagaagaaatttgctgatatct
gtcgcaatattcgatggggttcacacgtag
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