Diabrotica virgifera virgifera (western corn rootworm): 114325089
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Entry
114325089 CDS
T09922
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03022
Basal transcription factors
dvv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114325089
09124 Replication and repair
03420 Nucleotide excision repair
114325089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114325089
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114325089
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114325089
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114325089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
114325089
NCBI-ProteinID:
XP_050506912
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All DBs
Position
5:complement(242633380..242665747)
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AA seq
553 aa
AA seq
DB search
MATSMEDVLLQVPQVRYKKGDGSLFLMDQRLIWMVENKDTVVVSHPYADIKSQKISPEGK
AKVQLQVVLHNGVSSTFHFTNKSGMPAQLADRDKIKEMLQSLLPKFKRKVDRELEEKNKL
LSTNPALLQLYKDLVMTEVVTSEEFWSQHAQQYTQKQKQQPQDIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVKKKYIDNVPAKLSESQFWTKFFQSHYFHRDRKYAESK
DIFTECGKLDDQEMKKDIQTGVKDPLINITEFEDKTIDEGYGLTSEKPANSTGTVSQAMI
KRFNQHSIMVLKSSKNAGNDNLQQNGADKSTINANGVSVNGQTSSDGPVNKRQRLLEKIT
YDDLEDTNNDSNTKSVQLNLSKVERYLHGPMPDSSTDYLNPNEAASVLRGVIQETRQWGG
RHPTTSLVTPAAAVAALGELSPGGALMRGFQEQSLAQLVPPDIEKEVRNLYLALCELLKH
FWKCFPPTTPNTEAKLIKMHEALNRFHTAKLKPFEDKLIRELSPLSHHLTKHLNQLLNAA
YQKFNNWQKIKVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcgatggaagatgttttgttacaagtacctcaagttcgatataaaaagggc
gacgggtcgcttttcttaatggaccaaagacttatttggatggtcgaaaataaagatact
gtagttgtttctcacccctacgcggatataaaatctcaaaaaatctcccctgaaggaaaa
gccaaagttcagttacaagtagttcttcacaatggtgtttcttcaacatttcatttcact
aataagtctgggatgcctgcccagttggcagatagagataaaattaaagaaatgttacaa
tctctactaccaaaatttaaaagaaaagtagatagagaattagaagaaaaaaataagtta
ctttcaactaaccctgccttactccaattgtacaaagacttagtaatgactgaagttgta
acttctgaggaattttggtctcagcatgcacagcaatatactcagaagcagaagcaacaa
ccccaagatattggtgtttctggagcatttttagcggatataaaaccacagacagacggt
tgtaatggccttaaatataacattacccccgatattatagaatgtatatttaaaacatat
cctgctgtaaagaaaaagtatatagacaatgtccctgccaaacttagcgaatctcaattt
tggacaaaattttttcaatcacattattttcatagagataggaaatatgcagaaagcaaa
gatatttttactgaatgcggaaagttagatgaccaagaaatgaaaaaagatattcaaacc
ggagttaaagatccactaattaatataacggaatttgaggacaaaacgatagatgaagga
tacggtttaacttctgaaaaacccgccaatagcaccggaacagtaagtcaagcaatgatc
aaaaggtttaaccaacactctataatggtactaaaatcttccaaaaatgcagggaacgat
aatttacaacaaaacggagcagacaagagtacaataaatgccaatggtgtaagtgttaat
ggacagacgagtagtgatggtccagtaaataagaggcagaggctgttagaaaaaattaca
tatgatgatttagaagatacgaataatgatagtaatacaaagagtgttcaattaaattta
tcaaaagtcgaaagatatttacatggccccatgccagattcttccaccgattatttaaat
ccaaacgaagctgcttcagtattaaggggagttatccaagaaacgaggcaatggggagga
agacatccgacgacttcgctagtaacacctgcagctgctgtcgcagctttaggggaactg
tcaccaggaggcgctctaatgaggggattccaagaacagtcattagctcaattggtacca
cctgatatagaaaaggaagtccgaaatttatacttggctctttgtgaactactaaaacac
ttctggaagtgttttcccccgacaactccgaacacagaagcaaaactaatcaaaatgcac
gaagcattaaataggtttcatacggctaagttaaaacccttcgaagataagctgatccgg
gaattatctcctctatcacatcacctcaccaaacacctaaaccaattgctgaatgcagca
tatcaaaaattcaataattggcaaaagatcaaagtgcgttag
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