Diabrotica virgifera virgifera (western corn rootworm): 114325550
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Entry
114325550 CDS
T09922
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114325550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114325550
Spliceosome [BR:
dvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114325550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
PRP4
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR75_2nd
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR54
Nbas_N
Motif
Other DBs
NCBI-GeneID:
114325550
NCBI-ProteinID:
XP_050512143
UniProt:
A0A6P7F3L0
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Position
1:complement(50619624..50668380)
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AA seq
508 aa
AA seq
DB search
MSDEEEVQYVKKTKTIHYGSLEDSEKARLEAQSEDSNEEKSAPAAASPVQEPSEYMELED
AMSRDKQALIEEFERRRKARSINVSTDDAEVRRNLRQLGEAICLFGEGPADRRSRLRDIL
SRIGEDAVIRREAEEERKQHEKDQETTWYHEGPDSLRVARLWIAHYSLPKAKARLEEARR
MGELPAATKTARTQELQKKIHAMSIYCSQVGDVRPISYCQFSPDSKLLATASWSGLCKVW
SVPDCELKQTLKGHTCNVGAIVFHPNATSESEEKICSMASCAADGSVKLWDFASEEPIAD
IEGHMPHRVSRIGFHPSGRFLGTCCFDNSWRLWDLHQCTEVLHQEGHVKPVYCISFQVDG
SVCATGGMDAFARVWDLRTGRCIMFMEGHLKGILGIDFSSNGYHIATASEDNACKIWDLR
KRSILYTIPAHTNLISDVKFQKFTSNYLVTASYDNTVKLWTSKTWQPLKTLSGHDGKIMS
VDIAPNDQYIASSSYDRTFKLWTPELTQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaagaagaagttcagtacgtgaaaaagaccaaaacaattcattatggttct
ttggaagattctgagaaagctagacttgaagcacaaagtgaagatagtaatgaggaaaaa
tcggctccagcagctgcttcacctgtacaggagccttccgagtatatggaactggaagat
gctatgtccagagataaacaagctttaattgaagaatttgaaagaagaaggaaggctaga
tcaattaatgtgtctacagatgatgctgaagttagaagaaacttaaggcagttgggtgaa
gcaatttgtttatttggagaaggtccagctgatagacgctcacgacttagagatatactg
agcagaataggggaggatgcagtaataagaagagaggcagaagaagaaagaaaacaacat
gagaaagatcaagaaacaacttggtaccatgaaggtccagattcactaagagttgccaga
ttatggatagcccattattccctaccaaaggctaaagcacggcttgaagaagcaagaaga
atgggtgagttgccagctgccacaaaaacagctagaacacaagagttgcaaaaaaagatt
catgccatgtctatctattgcagtcaagttggagatgttagacccatatcctattgtcaa
tttagtcctgattcaaaattactggcaactgcttcatggagtggattgtgcaaagtttgg
tcagttcctgactgcgaattaaaacagaccttaaaaggccacacctgtaatgtgggagct
attgtctttcatccgaacgccactagtgaaagtgaagagaaaatctgtagtatggcatct
tgtgcagccgatggttctgttaagttatgggattttgcaagtgaagaacctattgcagac
atagaaggccacatgccccatagggtttcaagaataggatttcatccttcggggaggttt
ctgggaacatgttgtttcgacaattcgtggaggttatgggatctacaccaatgcaccgag
gtcttgcatcaagaggggcatgtcaaaccagtttattgtatatcatttcaagttgatggc
tctgtatgtgctactggtggcatggatgcttttgctagagtctgggatcttcgaacagga
cgatgtataatgttcatggaagggcatctaaaaggcattttaggcatagatttttcttct
aatgggtaccacatcgccacagctagtgaagacaatgcctgcaagatatgggaccttcgt
aaacgttctattctttacactatacctgcacacacgaatctaatatccgacgtcaaattt
cagaagtttaccagcaactatttagtgaccgcttcttatgataatacagtgaaactatgg
acaagtaaaacgtggcaacctttgaagacgttgtcaggtcacgatgggaaaattatgtct
gtagatattgcgcctaatgatcagtatatcgccagtagttcgtacgatagaacttttaaa
ctttggacgccggaattgacgcagtag
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