Diabrotica virgifera virgifera (western corn rootworm): 114326802
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Entry
114326802 CDS
T09922
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dvv04121
]
114326802
Ubiquitin system [BR:
dvv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
114326802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
114326802
NCBI-ProteinID:
XP_028131047
UniProt:
A0A6P7F8D1
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All DBs
Position
4:219147176..219399653
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AA seq
1719 aa
AA seq
DB search
MLDWGDREGDRFSFEDSDRFEEDSLCSWSSEPESLCNNWRGWKKPSATSTTYFGGSRRFS
DHPQVVPSLAELSARCVASHIPFELVEHVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLA
NGSADEFSRGETLHKTHMVKDPLQIGFHLSASVLQSPRGIHNVAVTFDRRRISSCNCTCN
STAYWCSHIVAVCLTRIHWPQLVTLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTA
QRLLDELLGSQPSAINSVCGAPDPTAGASANDQTSWYLDEKTLHDNIKKILIKFCVPAPI
VFSDVNYLSTVAPPAAAEWTSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIIT
EECLACEQILIWWFNTKVALLSGNSGYGGTGGGKHNNVNSNTHASQHACSSLCDEVVVLW
RLAALNPGLAPTERDMLHNQFTTWHLKILEKVSKCRNTTSSSQSHYSKNSASLKMDLEVF
TGFKPAIEACYLDWDDYPMPGITYTQDINPMYHCPFTCFRHGADSSRGESQVTQVNSSKA
VLNCEHPHIHTTHSHHHHHHHHHHHSLIRVTARYDYVNVMSMNPIEFTPHSQLNERDGNR
SSVSSEGFCEVDDDMNLLQENRFNDSDSQEGGGSDSSSNSSQDGRTPPTAQHSLSSDNDT
SKENYKPTQTVPIPNTSVSWTPQPQRVSSRRDSKDDSTSSSNSDSPQSGDEYNMYFYNSK
DVGLLNTNPQNIPKLEESEEKSGMFSSLKKCDDPWDVLFARAEGLHAHGHSREACILGVK
LAEELLMNPPDLMIEIPPFPKKKGKKQQVNPATHQLSCLASGTLSKCAFLCSVLAENSEH
FHLAFRVGMFGLEMARPPASTKPLEVKLANQEADLVNLLKRIPLGHKELQIIRERAEELK
EGTLRSRGEAMLPIMLASFIFDALVIPNITGRDRSKLVNLRMMSDEPLGFEAAVAALGLK
ANVSEADHPLLCEGTRRQRGDLAIALLMFYKDDCWKMARIMDRLLDKEIHQLLKMPLTSS
YYSSNPPTKSQYSNLKREDCDKVVTPISPFLPPTEMIPTDMACCSRPHSSTSAELEQGMN
NLSVNPQQGTVQQGAVTRTKDGRYKGKRAYPSIPNQPSEAGAHFMFELAKTVLIKAGGTS
STSLFTQPSTSQNHHGPHRALHMCAFQLGLYALGLHNCVSPNWLSRTYSSHVSWITGQAM
EIGAAAISFLIDTWEGHLTPPEVASIADRASRGCDDNMVRAAAELALSCLPHAHALNPNE
IQRAILQCKEQSDEMLEHACHTVENAAKGGGVYPEVLFQVAKYWYELYARNTPGGDQLLD
NEMPHDPVMDSHGALVALIEPPVQTDVPPPAQPVVVTTAPPPYTHAAPPVGMYVSHYNFV
PHHPPIAYGGPLHPLHPQAPPPTHVQMYQFPYPPPAPQPAPAAAFTPVPTSYATIPPPQQ
AAFTSAPSQYAQAPPPPTPATAVFAAPPGPQQGIQVQGSQPPPAQHVQYYGPTVTITQSV
QALRPATHMYAAPPPGMPPHVQQAMPRPHRPHQFNQAQMRYLLTAYRVGMLALETLARRV
HDDRPQAKYARNPPYGEDVKWLLRISKNLGTQYLHHFCVCAVNSIVSPFVLHDVAIEAAQ
YLSRNNPSLVMQHLRNALTPLVQKCQQMYIQCMHQKLYHLTSADYEDFVSIVCAARAAFQ
ITPDGSTQFKEWLQSIRRSKSCKKDLWSQINTALQANNK
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattggggggaccgtgagggtgacaggttcagtttcgaagactctgacaggttc
gaggaagattctttgtgcagttggagctcggaaccagaaagcctttgcaacaactggaga
ggatggaagaaaccttctgctacttctaccacctattttggtggcagcaggagatttagc
gaccatcctcaggtagtaccatcactagcggaactttcagcgagatgtgtggcgtctcat
attcccttcgaactcgtggaacacgtctatccaccggtaccggaacaacttcaacttcgc
attgccttttggagttttcccgacaacgaagaagatattaggctgtattcttgtttggca
aatggatcggcggacgagttttccagaggtgaaaccttgcacaagactcacatggttaaa
gatcctctacaaataggtttccatttatcggcgagtgttctacaaagtccgaggggcatt
cataatgttgcagtcacatttgacaggagacgaatttcttcttgtaactgcacctgcaac
tcgaccgcgtattggtgttcccacatcgttgcagtttgtctcactcgaatacactggcct
cagttggttactcttcgtgctccagtctccgaatcgctgtcccgccttcagcgcgatcag
cttcaaaaattcgcccagtacctcatcagcgaacttccccagcaaattttgcccactgcc
cagcgactcctcgacgaacttttgggctctcagccgtcggccatcaactcggtgtgcgga
gcacctgacccaactgcgggtgcgtccgccaacgaccagacgtcttggtacttagatgag
aagactcttcatgacaacatcaaaaagattctgattaagttttgtgtaccagcacctatt
gtttttagcgatgtcaactatctgagtacagttgcaccaccagcagcagcagaatggacg
tctcttctacggccactgcgagggcgagaacccgaaggaatgtggaacctccttagtatt
gttcgggagatgttcaaacgaaatgaccggaacgctattccacttctggagattatcact
gaagaatgtcttgcctgtgagcaaatccttatttggtggtttaacaccaaggtagcactg
cttagtggtaattctggttatggaggaaccgggggaggaaaacacaacaacgttaatagt
aacacacatgcttctcaacatgcctgttcttcgttgtgtgatgaagtagttgttctttgg
agattggcagcattgaaccctggtctagctccaactgaaagagacatgctacacaatcag
ttcaccacgtggcatttgaaaattttagaaaaagtaagcaagtgccgtaacaccacgtcc
agttcgcagtcccattacagtaaaaattctgcaagtctaaagatggacttggaagtattt
actggatttaaaccagctatagaagcttgttatctggattgggacgactacccgatgcct
ggaataacgtatacccaggatataaatccaatgtatcactgtccctttacctgtttcaga
catggagctgacagcagtaggggagaaagtcaagttactcaggtaaattccagtaaagct
gttctaaattgtgaacatcctcatatccatacgacacattcccaccaccaccatcatcac
caccatcaccatcattccctcattagagttactgcaagatatgattacgtgaacgtcatg
agcatgaatcctatcgaattcaccccacattcccaacttaacgaaagagatggcaatcga
tcaagcgtcagtagtgaaggattttgcgaggtggacgatgatatgaacctccttcaggaa
aaccgttttaacgattccgactcccaagaaggcggcggaagtgattcttcgagtaatagt
agtcaggatggaagaacaccgcccacggcgcaacattctctctccagcgacaacgatact
agcaaagaaaattataaaccaacacaaacagtaccgattccgaacacgtctgtctcgtgg
acgccccaaccgcaacgggtgtcatcgagaagagactctaaagacgattcgacatctagc
tccaactcagattctccgcagtctggagatgaatacaacatgtacttttataacagcaaa
gacgttggtttattaaataccaatccccaaaatatccccaaactggaagaatccgaagaa
aaatcaggaatgttttccagtttaaaaaagtgcgacgatccttgggatgtcttatttgct
agggcggaaggattgcacgcacacgggcatagtagggaggcttgcatcttgggtgtcaaa
ttggccgaagaactgttgatgaatccaccagatttgatgatcgaaattcctccatttcct
aagaagaaaggaaagaaacagcaagttaatcccgctacccatcagttaagctgtttggca
tctggcactctatcaaaatgtgcctttttgtgttctgtcctagctgaaaacagcgaacat
ttccatctagcctttcgagtgggcatgttcggcctagaaatggctcgacctcccgctagt
acaaaaccattagaagttaaactagcaaatcaagaagcagatttggttaatttgctcaaa
aggattccgctaggtcataaagaacttcaaatcattagagaaagggctgaggaactcaaa
gaaggtacactgagatcaaggggagaagccatgttaccgatcatgttggccagtttcatt
ttcgacgctctagttattccaaacattactggaagagatagatcgaaacttgtcaatttg
agaatgatgtccgatgaaccattaggttttgaagctgctgttgcggctttaggtctgaag
gccaacgtttccgaagctgaccatccattgctatgtgaaggcacgcgacggcaacgtggc
gacctcgccattgcccttctaatgttctacaaagacgattgttggaagatggctaggata
atggataggctcttagataaagaaattcatcagttattgaaaatgcctctaactagttct
tattactcaagcaatcctcctacaaagagccagtattcgaacttaaaacgagaagactgt
gataaagtagttacacctattagcccatttttgccgcctaccgaaatgatacctacagat
atggcttgttgcagtagacctcacagttcaacaagcgctgaactagaacaaggcatgaac
aacctgtctgtaaatccccaacagggaacggttcaacaaggagccgttactagaacgaaa
gatggtcgttacaaaggcaaacgggcgtatccctcgattcctaatcaaccctccgaagcg
ggagcccattttatgttcgaattggctaaaacagtactgatcaaagccggtggaacaagt
agtacctcgttattcacacaaccatctacgagtcaaaatcaccacggaccacatagagct
cttcatatgtgtgcttttcagttaggactgtatgccttaggtttacataattgcgttagt
cccaactggttaagcaggacttattcatcgcatgtttcgtggattacaggacaagctatg
gagataggagcagcagcaatatcatttttaatagacacatgggagggccatttgactcct
ccagaagtcgccagtattgcagatcgagcttcccgcggttgtgacgacaatatggttcga
gcagctgcagaacttgcattgtcctgtctcccccacgcgcacgctcttaatcccaacgaa
attcaacgcgctattttacaatgtaaagaacaaagcgacgagatgttagaacacgcatgc
cacaccgtcgagaatgctgctaaaggaggtggtgtctatcccgaagtacttttccaggta
gccaagtactggtatgagctatatgcaaggaatactcctggtggtgatcaattattggac
aacgaaatgcctcatgatcctgttatggactcgcatggtgccctggtcgccttgattgaa
ccacctgtgcaaacagatgtgcctcccccagcccaacccgtagttgttactactgctccc
ccgccatacacgcatgccgctccccccgttggaatgtatgttagccattacaatttcgtt
ccacatcatccccccattgcttacgggggccctctacaccccctgcatccgcaggcccca
ccgcccacccacgtgcagatgtaccagtttccatatcccccaccagcaccacagcctgca
ccagcggctgcgtttaccccggtgcctacgtcttatgcgacgataccgccacctcaacag
gccgccttcacaagtgcaccatcgcagtatgcacaggctccgcctccacctacacctgcc
acagccgtttttgctgcgccgccaggaccacagcaaggaatacaagtccagggttcccag
ccgcctccggcacagcatgtacagtattatgggcctacggtcacgattacgcagtcggta
caggccttaaggcccgctacacacatgtatgcagcacctcctccgggtatgcctcctcat
gttcaacaagcaatgccgagaccccacaggcctcaccaatttaatcaagcacagatgagg
tacttattaacagcttaccgagttggaatgttagctctagaaactcttgctagaagggtc
cacgatgacagaccgcaagcaaagtatgccagaaatccaccctacggggaagacgtaaaa
tggttgttgaggatttctaagaacttaggaactcaataccttcaccacttctgcgtatgt
gcagttaactctatagtaagtccattcgtattacatgatgtagcaatcgaagctgcccag
tatctctctcgaaacaatccaagcctcgttatgcaacatctacgcaatgcgcttacgcca
cttgtgcagaagtgccaacagatgtacatacagtgtatgcaccagaaattgtatcatctc
acgtctgcagactacgaagattttgtaagtatcgtgtgtgcggctagggcggcgttccaa
attacccctgacggctctacacaatttaaggaatggttgcagtcaataagaaggtcaaaa
tcttgcaagaaggacctatggtcgcaaatcaacacagcccttcaggccaacaacaaatga
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