Diabrotica virgifera virgifera (western corn rootworm): 114326867
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Entry
114326867 CDS
T09922
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114326867
03016 Transfer RNA biogenesis [BR:
dvv03016
]
114326867
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114326867
Spliceosome [BR:
dvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114326867
Transfer RNA biogenesis [BR:
dvv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
114326867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114326867
NCBI-ProteinID:
XP_050504803
UniProt:
A0A6P7F8K0
LinkDB
All DBs
Position
4:250541257..250587896
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AA seq
734 aa
AA seq
DB search
MTAFEEFGVLPEISKALDELAWMLPTDIQAEGIPLVLGGGDVLMAAETGSGKTAAFCLPV
IQIVWETLKDIQSGKSAKAAKESMSIPWTMSTLDRGNAIAVAPDGKRVQSREQKDWHGVR
CTRGINSGKWGFEATVTDEGLCRVGWSTLTANLDLGTDRLGFGFGGTGKKSNNRQFDNYG
EPFGKSDVITCLLDADSGEVKFLKNGVNLGTAFTADKQIISQGMFPAVVLKNAEMEFNFG
STPFKHSLPDGYKPIISVPHDKIFKNTNGQNDAAGQGIKLMNNAPQAIIIEPSRELAEQT
SEQIKKFKKYLSDPVIRELLVIGGINIKTQISHLQNVGADIIVGTPGRLEDLITGGYLSL
ANCRFFILDEADGLLKQGYTNLIETLHKQMPKVTSDGKRLQMIVCSATLHAFEVKKMAEK
LMYFPTWVDLKGEDAVPETVHHVVVTVDPQKDKSWGNLRRHINTDGVHNEDNVRPGNNSP
ETLSEAVKLLKGEYCIRAIDKHNMDRAIIFCRTKLDCDNLEKYMKMIDRNHYSCVCLHGD
RRPQERKANLEAFKNNKVKFLICTDVAARGLDITGLPFTINVTLPDEKSNYVHRIGRVGR
AERMGLAISLVSTVPEKVWYHGEWCSSRGKNCRNTNLTDNHPKGCCIWYNEPQFIGDIEE
HLNITIQQIGPDMEVPQDEFEGKVIYGEKRRNMGSLYENHTAQMAPIVRELSKLESSAQT
LYVQRHLTKLTRIC
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaattcggtgtactaccggaaatttcaaaggctttggatgaattg
gcttggatgttacctacagatattcaagctgaagggattcctctcgtacttggtggagga
gatgtacttatggctgccgaaactggtagtggaaaaactgcagcattttgtctcccagtt
atccagatagtatgggaaactctaaaggatatacagtctggaaaatcagctaaggcagct
aaagagagcatgtctattccatggacaatgtcaactctagacagaggaaacgctatagct
gtagctcctgacggtaaaagggtgcaatcgagagaacaaaaagactggcatggggtcaga
tgtacaagaggaataaacagtggaaaatggggattcgaagccactgtaacagatgaagga
ctctgtagagtaggttggtctacgctgacagctaatttggatcttggtacagacaggtta
ggtttcggtttcggaggcacagggaagaagtcgaacaatagacaatttgataactatgga
gaaccattcggcaagagcgacgtcatcacttgtctattggatgcagactctggagaagta
aaattcttgaaaaatggagtgaatcttggtacagcttttacggctgataaacaaatcatt
agtcagggaatgtttccagcagttgttctaaagaatgctgaaatggagtttaactttgga
agtactccatttaagcatagtttgcctgatggatataagccaataatctcagtaccccac
gataaaatttttaaaaatacaaatggtcaaaatgatgcagctggtcaaggtatcaagctc
atgaacaacgcaccacaggcaatcattattgagccatctagagaattggccgaacagacc
agtgaacagattaaaaagttcaagaaatatctaagtgatcctgtcatccgagaacttctt
gtcataggtggaattaatattaaaacgcaaatctcccatcttcagaatgttggagctgat
attattgttggaacacctggaagattggaggatctgattacaggaggttacttgtctcta
gcgaactgccgattttttattcttgatgaggctgatggtttacttaaacaaggatatact
aatttgatcgaaacactacataaacaaatgccaaaagttacatcagatggcaaacggtta
cagatgatcgtgtgtagtgccacattgcatgcttttgaagttaagaaaatggctgaaaaa
ttgatgtattttcctacatgggtcgatctgaaaggagaagatgccgtcccagaaacagtt
caccatgttgtagtaacagtagatccccaaaaggataagtcatggggtaatttaagaaga
cacattaatacagatggcgtgcacaatgaagacaacgttagacctggcaataatagtccc
gaaacattgagtgaagccgtcaaattattaaaaggtgaatactgcattcgagccatagac
aaacataacatggaccgagctattattttctgtcgtacaaaactggactgtgacaatttg
gaaaagtatatgaagatgatcgatagaaatcattactcctgtgtgtgcttacacggtgat
agaagaccccaagaaagaaaagctaacttggaagctttcaaaaacaataaagtcaaattt
ttgatttgtactgatgttgcagctagagggctcgatataactggtctaccgtttacaatc
aatgtaacattgccagatgaaaaatccaactatgttcacagaattggacgtgtaggaaga
gctgaaagaatgggtcttgccataagtttagttagtacagtaccagaaaaagtgtggtac
cacggtgaatggtgttcatcgagaggaaaaaactgccggaataccaacttaaccgataac
catcctaagggatgctgtatatggtacaatgaaccacagttcattggcgacattgaagaa
catttgaacatcaccattcagcaaatcggacctgacatggaggtaccacaagatgaattc
gagggcaaagttatttatggagaaaaacgaagaaatatgggctcgctgtatgaaaaccac
accgcgcagatggcgcccattgtcagagaactgtctaagttggaaagcagtgcccaaaca
ctgtatgtccagagacatctaactaagttaactagaatttgctaa
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