KEGG   Diabrotica virgifera virgifera (western corn rootworm): 114326988
Entry
114326988         CDS       T09922                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
dvv  Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03420  Nucleotide excision repair
dvv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dvv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    114326988
   03460 Fanconi anemia pathway
    114326988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dvv03032]
    114326988
   03400 DNA repair and recombination proteins [BR:dvv03400]
    114326988
DNA replication proteins [BR:dvv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    114326988
DNA repair and recombination proteins [BR:dvv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114326988
SSDB
Motif
Pfam: ERCC4 SAM_KSR1
Other DBs
NCBI-GeneID: 114326988
NCBI-ProteinID: XP_050510809
LinkDB
Position
6:25165079..25192960
AA seq 907 aa
MDEQLNETEKLLDKADLKYMLEFETQIFLDCIHNDGLIVASKGINLNLVILNLLKVYCDE
GNLVLVLKSTEAEEKYYREKLKDPHVYNSTPLTKDREDNYLSGGIHFVTIRVLVVDMLKK
RIPIEKITGIIVLKAHSILESCQEAFALRLYRQNNKTGFIKGFSNNVHSFTIGYGHVDRV
MRALFVKELYIWPRFHSTIVRSLKARQPNVIELHIPISDKMKRMQTHILDLMNLTVKELK
RLNQTIELQEITVENCLTKKFHKILQAQLDVIWHQLSKNSLQLVADLKTLRHLMITMFHS
DPVSYYSSVMGYRSKEYAQHASWVLLEPAELLFSQVSSFIFNDKKEFHPDLCPKWKPLLE
ILQVEIPAEMKKRNLKDSTILILSSDYRSCHQLKELLTKGPHLYLFLRSCGSKIPIKKIS
DAFRVNDKIPAEVVVPEEKPDNKNLKNKKLKLDSKSTSSESDPKDNTEDNKDEEEIEDFQ
NSYILTMSQTICENKHETTSRNESTFVFEPFSQMENMDLTQICETVHEPKILIQTFKGSN
EFTNLQNTLENVKPHFIVMYHCSMTAVREIEMYESHRTDEAPVQVYFLLHADTVEEQSYL
TTLRREKEAFEYLIEAKSKMVIPADQDGKSDDNIALQRGVISPEKNTRQGGQEQTPKKQV
VIVDMREFRSELPTLIHKRGMDIEPLTISIGDYVLTPDICVERKSISDLIGSLNSGRLYQ
QCTNMSRFYSKPMLLIEFDQNKQFGWRANYMISSDCNNFDIQQKLLLLTLHFPKLKIIWS
PSPYATAQLFEELKLGKDDPNVAYAAALGGEQDLDVIESKYNSNIYDFVQKLPGITSKNI
DAFLRKGISMDEVTKKSEEELKEILGSSIDAQSLYSIIHGEHKPQPEEDKKKERPKTRFK
SFKKKQA
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggacgaacaattaaatgaaaccgagaaattattagataaagctgatctaaaatatatg
cttgagtttgaaactcaaatatttctggactgtattcataatgatggattaatagtcgca
tctaagggaattaatttgaatttagtgatattaaatctattgaaagtatactgtgatgaa
ggaaacttagttttagtcttaaagagcactgaagcagaagaaaagtattatagagagaag
ttgaaagatccacatgtctacaatagcacacctctcacaaaagacagagaagataattat
ttgtctggaggtatacactttgtgaccattcgagtattagttgttgatatgttaaagaag
agaataccaatagaaaaaataactggaattattgttctaaaagctcattcaatattggag
agttgtcaagaagcttttgcactaagattgtatcgtcaaaataataaaaccggtttcatc
aaaggtttctcaaataatgtgcacagttttacaattggttatggacacgtggatagagtc
atgagagctttatttgttaaagagttgtatatttggcccagattccattccacaatagtg
cgaagtctgaaagctcgtcagccaaatgtaatagaactgcatattcctataagcgacaaa
atgaagagaatgcagacacatatactggacctcatgaatttaactgtaaaggaactgaag
cgtcttaatcaaactatagaattacaggaaataacagtagaaaattgtttaactaaaaaa
tttcacaagatacttcaagctcaattagatgttatttggcaccaactaagtaaaaacagt
ctacaattggtagctgatcttaaaacgttaagacatttaatgattaccatgtttcattcc
gatccagtgtcttattattcatcagtgatgggatatcgttcaaaagaatacgcacagcat
gcatcttgggttcttctggaacctgccgaacttctattctcccaagttagttcctttatt
ttcaacgacaaaaaagagtttcacccggatttatgtcctaaatggaagcctctattggag
atacttcaggtcgagataccagcggaaatgaaaaaaaggaacctcaaggatagtacaata
ctgatcttgtctagtgattataggagctgtcatcaattaaaagaactactaacaaaaggt
ccacatttatatttattcctacgatcatgtggaagtaaaataccgatcaaaaaaataagt
gatgcttttcgagtaaatgacaaaattcctgctgaagtagttgtccctgaagagaaaccc
gataataaaaatttgaagaacaagaaattgaaactggattctaagtcaacaagttccgaa
agtgatcccaaagacaacactgaagacaataaggacgaggaagaaattgaagattttcag
aacagttatattcttactatgagccaaactatttgcgagaataaacacgaaactaccagt
aggaatgaaagtactttcgtttttgaacctttctcacagatggaaaacatggacctcact
caaatatgcgaaacagtacacgagccaaaaattctcatacaaactttcaaaggatccaac
gaatttactaatttgcagaatacattggagaacgttaaaccccatttcatcgtcatgtat
cattgtagtatgacagctgtaagagaaattgagatgtatgaatcgcataggacagacgaa
gcgccggttcaagtatatttcctgctacatgccgataccgttgaagagcagagttattta
actacacttaggagggagaaagaagcgtttgagtaccttatagaggctaaatccaaaatg
gtgatacctgccgatcaagatgggaaatctgacgataatatcgccctgcagagaggtgtt
ataagcccagaaaagaatactcgacaaggaggccaagaacagacaccaaagaaacaagtt
gtaatagttgacatgagagaatttcgaagtgaattaccaactcttatacataaaaggggt
atggatatcgaaccccttaccatttcaattggagattatgtactgacacctgacatttgt
gtggaaaggaaaagtatttctgatcttataggatctttaaactctggaagattatatcaa
cagtgtactaatatgtctcgattttattcaaaacctatgttgctgattgaatttgatcag
aacaagcaattcggatggcgggccaattatatgatatccagcgactgtaataactttgat
atccaacagaagctacttttacttactttacactttccaaagttgaagattatttggagt
ccaagtccatatgctacagcgcagctgtttgaagaactgaagttgggtaaagatgatcca
aatgttgcttatgctgcagctctgggaggagaacaagatcttgacgtaattgagtcaaaa
tacaattcaaacatttatgactttgttcagaaactgccaggaattacctctaaaaatatc
gatgcatttttaaggaaaggtatcagtatggatgaagttacgaaaaaatctgaggaggaa
ttgaaagaaattcttggaagttctatagatgctcaatcactgtattctattattcacggc
gaacataaacctcaaccagaagaggacaagaaaaaagaaagaccgaaaactagatttaaa
agctttaaaaagaagcaagcatga

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