Diabrotica virgifera virgifera (western corn rootworm): 114327648
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Entry
114327648 CDS
T09922
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114327648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114327648
Spliceosome [BR:
dvv03041
]
Complex B
Other components
Prp19-related factors
114327648
Complex C
114327648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
RRM_YTH1
RRM_3
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
114327648
NCBI-ProteinID:
XP_028132120
UniProt:
A0A6P7FFU4
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Position
9:complement(209249485..209272298)
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AA seq
418 aa
AA seq
DB search
MATSKTTNTYNRQNWEDADFPVLCQTCLGDNPYIRMTKEKFGKECKICSRPFTVFRWCPG
AKFRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKLRDDLPKSDVNKEYYIQN
MENELARSDPDSISSKLSEPNDLLMRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRH
EKPTDPDDPLADQNIKDRYYGVNDPVAEKLLKRAAAMPALPLPDDKTITTLYLGNLGHLT
EQDIRDHFYQYGEVRSISLVPKQQCAFVQFTTRSAAETAAEKTFNKLILGGRRITIKWGR
SQGRTGPSSIAHHAENYEPVPGLPGALPELSNNFFNLEPGHIPLPNMPPPSSIMVPPLFA
PPPIPPFFFNAPQLPPFSTPAPSTSTSSSVSEPVVVPKPVHYPSQDPSRLGATQQIQE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcaaagacaacaaatacgtacaacagacaaaactgggaagatgctgatttt
cctgtgttatgccagacttgtttaggtgataatccatatattagaatgacaaaagaaaag
tttggaaaagaatgcaagatctgctcacgtccattcacagtatttcgttggtgcccagga
gcgaaatttcgtttcaagaaaacagaagtgtgtcagacatgtagtaagcttaaaaacgtg
tgccagacttgtttgttagatttagaatatggtctacccattcaagtgagagatgccgca
ctaaagttaagggacgacttgcctaagagtgacgtcaataaggaatactacattcagaac
atggagaacgagctggcgagatcagatccagactcaatcagcagtaaactgagtgaacca
aatgatcttctgatgagattagccaggacagctccatattacaagagaaataggccccat
gtgtgctctttctgggtaaaaggggagtgcaggagaggagaagagtgtccctacaggcat
gaaaagcccacagatcctgatgatccattagctgatcaaaacatcaaagaccgttattat
ggagtgaacgatccagtagctgaaaaactattgaagcgagcagctgcaatgccagccctt
cctttaccggatgacaaaaccataacgaccctgtatttaggaaatctgggacatttaaca
gaacaggatatcagggatcatttttaccaatatggtgaagtccgttccatcagcttagtg
ccaaaacagcagtgtgccttcgtccaattcaccaccaggtctgcagcagaaacagcagcc
gaaaaaaccttcaacaaactgattctcggcggaagacgaatcaccatcaaatgggggcgc
tctcaaggccgtaccggaccttcatcaatcgcacaccacgctgaaaactacgaacctgtc
cccggattacccggagcattgcccgaactaagcaataacttcttcaatctggaaccgggt
catattcctttaccgaatatgcctcctccttcttctatcatggtccctccactattcgct
ccccctcctatacctccattcttcttcaatgctccacagttgccgccgtttagtactcct
gcgccaagtactagcactagctccagtgttagtgaacctgtagtggtacccaaaccggtt
cactatcccagtcaggatccatccaggttgggagctacacaacagatacaggaataa
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