Diabrotica virgifera virgifera (western corn rootworm): 114327791
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Entry
114327791 CDS
T09922
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03030
DNA replication
dvv03410
Base excision repair
dvv03420
Nucleotide excision repair
dvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114327791
03410 Base excision repair
114327791
03420 Nucleotide excision repair
114327791
03430 Mismatch repair
114327791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvv03032
]
114327791
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114327791
DNA replication proteins [BR:
dvv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114327791
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114327791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_30
AAA_22
Rad17
PTCB-BRCT
AAA_14
AAA_18
RuvB_N
AAA_17
AAA_5
RNA_helicase
AAA_33
BRCT_2
AAA_16
TIP49
RCF1-5-like_lid
AAA_28
AAA_6
AAA_19
Motif
Other DBs
NCBI-GeneID:
114327791
NCBI-ProteinID:
XP_028132302
UniProt:
A0A6P7FBV7
LinkDB
All DBs
Position
1:complement(153411655..153594519)
Genome browser
AA seq
1117 aa
AA seq
DB search
MMPKDIRSYFTPVSKNNTPSKAANQKKKSKRLIDSDEEDVIESTPEPCKVKSFSSKRKPE
AVLLSSDSEEDKPKKPVKDPTKLKPINIDDVFSSKPIQQAKIKELPKGEAVIVEHKDKSH
KHKKKKTKTEIGVHEDEAFEKTLMELDDDLLADNLDILDKTADDALNIKTTHREGVKTKS
KKGSNNKDTPVKDSKREEKHEDEIKKKKMETESEVHTDEDFNKTLKDLDTESSKSNQSCT
KPKIVVDDVEPKQSSSKENSPNKSNDEKRTKRHRSPSKGTTPKKPKLEQSDPDIDPDQEA
FEKRRYSAMLYQKYKNRGGPKMHGQKELPKGNPDCLKGITFLRTGVLDSIDGEEFQNLVV
EHGGRVVHAVSKKVNYLVVGEEPGPSKLDKARGFKIPEINEDQFLDLILIKSGMKAKYYH
KDSSDSGVFEEDIDNDKKNKKQKEEHEKNKVPRNEEKHSNKGKRSESSPKDIKKSSMKNK
EKQTNGNSSKPDTKEEKIVTSKFFDTKKTSAETKQSTDFLKTSSFYSNKEKKPEKQPVTE
NIESPITVSDLSMTWTEKYKPTDIKSVIGQQGDSSNLGKLKKWLSNWYRNQLPEVRKKIP
RPSPWAKNDDGAYYKAALLSGPPGVGKTTTATLVSKELGFDVVEFNASDTRSKKLLHEEV
AQLLSTTTIAGFAAGKTKTDKKRVLLMDEVDGMAGNEDRGGIQELINLIKTTSVPIICMC
NDRNHQKMRSLVNYCFDLRFSKPRLEQIRGAMMSICFKEGLKLSPNILSEIISGTGCDIR
QTLNHLTMWSAQKDNLTLEEVQNKAKQSKKDTVLGPWEVVRTVFTESEKKNMSVADKARL
FFYDYSMGPLFVQENYLGVTPNCPKSEVMKRVALAADSISRGDLIDAKIRGSNNWALLES
QAFFASVLPGHYMSGHVSSRINFPGWLGKNSAANKRKRMLNELHVHTRMSTSGSLLAMKL
DYILPLRNAIITPLLKEGVNGIQEAIGVMNDYNLLREDLTNLLELCQWKDMKNPFNDIEA
KVKSAFTRAYNKSAKQLPFAPGTGFSKKKSSQVDDPEGEDNLLESDNDEADEENDDVTHD
ALIKVKTGNKKENAKATTSKSSESSKGKGKGKGKKSN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaaggatatcagatcatacttcaccccagtttcaaaaaacaatacaccatcc
aaggcagcaaatcaaaagaaaaaatctaaacgtttaatagactctgacgaagaagacgtg
attgaatctacacctgagccatgtaaagtgaaatcgttttctagtaaaaggaagccggag
gctgtattgttgagttctgattccgaagaggacaagcccaaaaaaccagttaaagatcca
acaaaattaaaaccaataaatatagatgatgtttttagcagtaaacccatacaacaggct
aagataaaagaacttcctaaaggtgaagctgttatagttgaacacaaggacaaatcgcat
aaacataaaaagaaaaagactaaaacagaaataggagtacatgaagatgaagcttttgag
aaaactctcatggaactggatgatgacttacttgcagataacttggatattctggataaa
acagcagatgatgctttaaatataaaaactacgcatagagaaggcgtaaagaccaaatct
aaaaaaggttccaataacaaagataccccagttaaagatagtaaaagggaagaaaaacat
gaagacgaaattaaaaagaaaaagatggaaactgaaagtgaagtacacactgatgaagat
tttaataaaacattgaaagatctggatactgaaagttcaaagagcaatcaatcttgtaca
aaacctaaaattgttgttgatgatgttgaacctaaacaaagcagttccaaggaaaattct
ccaaataagtcgaatgatgagaaaagaactaaaagacatagatctccatctaaagggact
actcccaaaaaacctaaactggaacagagtgatccagatattgatcctgatcaagaagca
tttgaaaaaagaaggtattcggccatgctatatcaaaagtacaaaaacagaggaggtcct
aaaatgcatggacaaaaagaactgccaaagggaaacccagattgtctcaaaggtataacg
tttttacgaactggtgtactggattctatagatggtgaggaatttcaaaatttggttgta
gaacatggaggaagagttgtacatgctgtgtcaaaaaaggtaaattatctggtggttggg
gaggaacctggcccttcaaagttagacaaagctagaggttttaaaatacccgaaataaat
gaagatcaatttctggacttaattttaataaaatcaggtatgaaagcaaagtactatcac
aaagattcgtcggattctggagtttttgaggaagatattgataatgacaagaaaaataaa
aaacaaaaagaagaacatgaaaaaaacaaagtgccaagaaatgaagaaaaacattctaac
aaaggaaaacgaagtgagagttcaccaaaagatatcaaaaagagttctatgaagaataaa
gaaaagcagacaaacggcaactcatcaaaacctgatactaaggaagaaaaaattgttact
tctaaatttttcgacacaaaaaagaccagtgcagaaactaaacaatcaacagatttctta
aagacgtcaagcttctactctaataaagaaaaaaaacctgaaaaacagccagtaactgag
aatatagagtcacctataacagtttctgatttatctatgacttggactgaaaagtataaa
ccaactgatatcaaaagcgttattggtcaacagggtgatagtagtaatttgggcaaactg
aagaagtggttatcaaattggtatagaaatcagttacccgaagttagaaaaaaaatacct
agaccttcgccatgggccaaaaatgatgatggagcctattataaggcagctttgttgagt
ggtccaccaggtgtaggaaagaccacaaccgcaacattagtgtccaaagaactaggtttt
gacgtcgttgaatttaacgcatccgatacccgaagcaaaaagctgttacatgaagaagta
gcgcagttattaagcacaacaacaattgcagggtttgcagctggcaaaacaaaaactgat
aaaaagcgagttcttcttatggatgaagttgatggtatggcaggaaatgaagataggggt
ggtatccaggaactaataaatctcataaaaacaaccagtgtaccgattatttgtatgtgt
aatgacaggaaccaccaaaagatgagatcattagttaattattgttttgatttacgattt
agtaagcccagattggagcaaattcggggtgctatgatgtctatttgtttcaaagaaggt
ctaaagttatctccaaatattttgtcagaaataatatctggaacaggctgtgatattcgg
caaactttgaaccatctcaccatgtggtcggcccaaaaagacaatctcactctcgaggaa
gttcagaacaaagcaaaacaatctaaaaaagatactgttctgggtccgtgggaagtggtt
agaacagtttttactgaatctgaaaagaagaatatgagcgtagctgataaagctagatta
ttcttttacgattacagcatggggccactttttgtgcaagaaaattatttgggagtcaca
cctaattgcccaaagtctgaggttatgaaacgggtagcactagctgcagattccattagc
agaggtgacctaatagatgcaaaaatcagaggatccaataattgggcccttttagaaagt
caagcgtttttcgcttctgttctgcccggtcattatatgtccggacatgtttccagtagg
atcaattttccaggatggttaggaaaaaattcagcagcaaataaacgtaaaagaatgctt
aatgaactacatgttcatacaagaatgagtacatcaggaagtcttttggctatgaaattg
gactacatcttgccgttgagaaatgccataataacgcctttgttaaaagagggagtaaat
ggtatccaagaagcaataggcgtaatgaatgattataatttgttaagagaggacttgacc
aacctcttagagctgtgtcagtggaaagatatgaagaatcccttcaatgatattgaagca
aaggtaaaatccgcttttacacgggcctacaataaatcagcaaaacagttaccattcgcc
ccaggaaccggtttttccaaaaagaaatcatcacaagttgatgatccagaaggtgaagat
aatttacttgaatctgataatgatgaggccgatgaagaaaatgatgatgtaacgcatgat
gctctcattaaagttaaaacaggaaataaaaaagaaaatgccaaagccacaacaagtaaa
tccagtgaaagctcaaagggtaaaggaaaaggcaagggaaagaagtctaattaa
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