KEGG   Diabrotica virgifera virgifera (western corn rootworm): 114328037
Entry
114328037         CDS       T09922                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
dvv  Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:dvv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dvv03000]
    114328037
   04121 Ubiquitin system [BR:dvv04121]
    114328037
Transcription factors [BR:dvv03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    114328037
Ubiquitin system [BR:dvv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114328037
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf_CCCH_4 zf-CCCH_4 zf-RING_UBOX zf-RING_2 zf-C3HC4 PaaA_PaaC Vesi_VP2 zf-RING_6 zf-C3HC4_4 Prok-RING_4
Other DBs
NCBI-GeneID: 114328037
NCBI-ProteinID: XP_028132577
UniProt: A0A6P7FCQ7
LinkDB
Position
9:27655890..27799168
AA seq 898 aa
MVISNFRMPIQAPQWTEFLSCPVCCNSFDEKLRSPISLGCSHTICRVCLSNLPRRQCPFD
QTNISIDIENLPINTALLQLVGPNVRNDNDEIDCKIIPREYLDYYLQCKRYIEQLALYLK
PYPSGSVCSSGSILSRPMQRKLVTLINCQLVEDEGRTRAMRAARSLGERTVTELILQHQN
PQQLSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFP
QASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYDALRREHDAQIVQIATEAG
LRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTGDPGKLSVLRN
HLDLLAAIDPSPESTSPSWSACAECLEAVRQVVAGLVEFIHQHGSRKLQDTAHSQHAKYK
ISMCRDLTLRGSCPRGTNCTFAHSNEELEKYRAKNRKTITRNKEHRIENHSPTEKPFNQS
EDYYSISNTSTVSPVPLQPVVQIPRMGYDVPYHPNPTYPSTQPFTQPVYQPQPSTFPVHE
IYSPPNHGNIVLANGGQYYQPQQGEYPSIGNQPQQGVDMKRSWEVVMSQIAKNQNFNQQP
KLNRSSTKSLAELHQRKQEVISQLEKVVGKNAATEISNHASTLARQESQHDLESPTSPYN
FWPHITTSGPTFVRSDSILAADDDCVPYDSPAISKYGPISRMHKDNGINQSVGGQFRDNQ
ALIRRPVTSASPLTYFNYNNNSHYHQAAIPTGHAMVGHPGSEGFVAYNSQFLFHPRLQDP
SKELIAESQRVKLQLRNLEKQLNDLKIATQGVTNLSDSERLTQELQLIEQGIQEKQKEAC
LSKIVQSLNQVMGNYNNGNPSGTSDDAMYEAGIANDMRELELRLQEELEEWSGEDSPK
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggtgatttcaaattttagaatgcccatccaggcacctcagtggacggagttcctctct
tgcccagtttgctgcaacagctttgatgaaaaacttcgcagtccaataagtctgggctgt
agccacacgatatgcagggtttgtctttcgaacttaccaagaagacagtgcccctttgac
cagacgaacattagtatcgacatagaaaacttgcccatcaacactgctttactgcaactg
gttggaccaaacgtaaggaacgacaatgatgaaattgactgtaagattattcctagggaa
tacctagattattatttacaatgtaaacgatacatagagcaacttgctttatacttaaag
ccctatcctagtggaagtgtgtgtagcagtggaagtatcctttcgagacctatgcaaaga
aaactagtcactctgatcaactgtcagttagtcgaagatgaaggacgaacaagagctatg
cgagctgctagatcgttgggcgaaagaactgttacagaacttattctgcaacatcaaaat
ccccaacagctgtctgcgaatttgtgggccgctgttagagccagaggttgtcagtttcta
ggtccagccatgcaagaagaagtgctaaaactggtacttttagctttggaagatggttca
gctctatctaggaaggttctggtgatgttcgtcgtacaacggctagagccgcatttcccg
caagcttcaaaaaccagtataggacacgttgtacaattgttgtacagagcttcttgtttt
aaggtttcgaaaagggaaggggattcctcgttgatgcaactcaaagaagaattccgaacg
tacgacgccctccgtcgagaacacgacgcccagatcgttcaaatagcaaccgaagcagga
ttaagaattgccccggaccaatggtcggctctactatacggagacaccgcgcataaatcg
catatgcagagcatcatcgacaaacttcagactccacagagcttcgctcaatccgtgcag
gaattggtgattgctttacagagaacgggggatcccgggaagttgtcggtgttgaggaac
catttggatttgttggctgcgattgatcctagtcctgaatcgacttctccttcatggagt
gcttgcgcagaatgtctggaagctgttcgacaagtcgtggccggtctcgtagagttcatt
caccaacatggaagtagaaaactgcaagacactgcgcactcacagcatgccaagtacaag
atcagcatgtgtcgagatttgactctgagaggaagttgtccaagagggacaaactgcact
ttcgcacactcgaacgaagagctggaaaaatatagagcaaagaatcgcaagacgataaca
agaaacaaagagcaccgcatagaaaatcattcgccaactgaaaaacccttcaaccaatca
gaagactattactccatctctaacacgtcgacagtaagtccagtaccactacagccagta
gtccagatacctagaatggggtacgacgtaccgtaccatcccaatccaacgtatccttca
acgcagccctttacacagcctgtgtatcaacctcaaccttcaacgtttcctgttcatgaa
atttattctcctccaaaccacgggaacattgttctcgcaaacggagggcagtattatcaa
ccgcaacaaggagagtatccttccattggaaatcaaccacaacagggagttgatatgaag
aggtcttgggaagtagtgatgtcacagatagccaaaaaccagaacttcaaccaacaaccc
aaactgaacagaagctcgaccaagagcttagccgagctacaccaacgaaaacaagaagta
atttctcagttagaaaaggtagtaggcaaaaacgctgctactgagatttccaaccacgca
agcacactggctagacaagaatcgcaacacgacttagagagcccaacgtcaccgtataat
ttttggccgcatattaccacgtccggtcctacgttcgttagatcagactcgattttggcg
gcagatgatgactgcgttccgtatgactcgccagctattagtaaatatggacctatttcg
aggatgcataaagataatggaatcaatcaatccgtgggtggtcagttcagagataatcaa
gctttgataagacgacctgtcacctcagcaagtcctctaacttattttaactacaataac
aacagccactaccatcaagcggccataccgactggtcatgccatggtaggacatccaggt
agcgaaggatttgttgcttataattcacagtttctctttcatccgaggctccaagatccc
tccaaggaactgatcgctgaatcgcagagggttaagcttcaactgcgaaacctcgagaaa
caactcaacgatcttaaaatcgctacccagggtgtaactaatttgagtgacagcgaaaga
ctgacgcaggagcttcagttaatcgaacaaggcatacaagagaaacagaaggaggcttgt
ctgtcaaaaatcgtccaatccctcaaccaagtgatgggaaactacaacaacggtaaccca
tcggggacctctgacgacgccatgtatgaagcaggtatagccaatgacatgcgcgagcta
gaactgagactacaagaagaattagaagaatggagcggtgaagactcaccaaagtaa

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