Diabrotica virgifera virgifera (western corn rootworm): 114328115
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Entry
114328115 CDS
T09922
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
114328115
Membrane trafficking [BR:
dvv04131
]
Protein recycling
Others
EARP complex
114328115
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GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Sec8_N
HCNGP
Motif
Other DBs
NCBI-GeneID:
114328115
NCBI-ProteinID:
XP_050500093
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Position
2:198481800..198583715
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AA seq
952 aa
AA seq
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MSNKMDELKHKFLGLINKQPPKIPSMGFNDANYHFSDVPTLSINSKTVQEVDRPADQDIL
EGIEAAYFSINPEFDICRFELEKLPETLDCDQIQRDFKKLKQQHQVVSKKVLQLILEHQT
GCNGEFEKMTEILDNVKETLELCRSSRKELKVAASQFTDSLGILANYRKRKMAQNLLNNL
NTIKDLHSFEKRCQEMIMEEDFVRAITELKRCQKIATQYRHFSCVAALTYKIQETLENTD
SQLDRILAQICFHFDKERYRKLQAAYDLLEKSQVSMIDNLHVHYITAIYNSSFNVIQSYI
SSPDILDSSENSGKNPYTVLCQAINQDVFIPCLIQLCKVLFKIVLSYHKLVKWHNSDHDL
EYAECENDIIASKQKLNHNVTKIWDDVQRKVSGLLLNGDLARYKFDQFVQVLRVVHRLIQ
VGEEFCSSKSEDLQESIKKQSENYFLNYHAQRLEELKIFLENEMWEICPVKSSFYIMQLQ
EFKPFRYSMKTFKFNPQTSPTTMNYSTNSTECSSTHSLDGSSIIGNYFIRFAEHGTPFDS
GLDEIVIDEDIMVTENDGSGYYSEESDDNDDLENEYVEELNNLRHVNSKERKDKTQPNNP
VLTNTSLTVLRQMGKYIQMSRLLKPIAFRIISCMNQLFDYYLYSVHLFFTADLVVSSTNL
YSQELNMTLQRISNDLILENVIIDEENQGRDGRVCKPSISPMTELKNPEKLNGLAERIVA
VESLVFLSKQFEFLQEYLDYLVPQNFKGVLQQFFLQTIASAPDLRNPVYMAVVAQAFDLR
QILTSMSKINWEVRDVRSMHNSYVDTLLREVQIFTLRLEEIAIKVPISTEAYHNIWRNVA
HIVTHTLVQGFSEAKKCTNGGRALMQLDFTQFLTKFEKISSLKPVPHKEYVENYVKAYYL
PDIELEKWIRDHKEYSSKHMLGLVSCACQNNKKTRQKLLQVIEDIEKNKFPR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaaatggacgaacttaaacataaatttcttggactgataaataaacagcca
ccaaaaataccctctatgggatttaacgatgcaaattaccatttttctgatgtacccacc
ctttcaattaacagtaaaactgttcaggaagtagatagaccagctgatcaagatattctt
gagggcatagaagctgcctatttttctatcaacccagagtttgatatatgcagatttgaa
ttagaaaaattacctgaaactcttgattgtgaccaaattcaaagagatttcaaaaaattg
aaacagcagcatcaagtagtctccaagaaagtgttgcaattgatattggagcatcaaaca
ggttgtaatggcgaatttgaaaagatgaccgaaattttagataatgttaaagaaaccttg
gagttgtgtagaagtagcagaaaggagttaaaagtagctgcaagtcaatttactgacagt
ttgggtattttggcaaattatagaaaacgaaaaatggctcaaaatttgctaaataattta
aatactattaaggatttgcatagctttgagaaaagatgccaggaaatgataatggaagaa
gactttgtcagagctatcactgaattaaaacgatgtcagaaaatagctacccagtataga
cattttagttgtgttgcggccttgacttataaaatacaggaaactttagaaaacactgat
tcccagttggatagaattttagctcagatttgttttcattttgataaggaaaggtacaga
aaactgcaagctgcctatgatctcttagaaaaatcacaagtatcaatgattgacaatttg
cacgtgcattacattacagccatatataattcttcttttaacgttatccagtcatatatt
tcatcacctgatatattagattctagtgaaaatagtggaaagaatccatacacagttttg
tgccaggctattaatcaagacgtttttattccatgcctgattcaattgtgtaaagttctt
ttcaaaatagttttaagttaccacaagttggttaagtggcacaattctgaccatgacctc
gaatatgcggaatgtgaaaacgatattatagcaagcaaacaaaaattaaaccacaatgtt
acaaaaatttgggatgatgtacagaggaaagtgtctggtctcttgttgaatggagatttg
gcgaggtataagtttgaccagttcgtgcaagtactcagagttgtacacaggttaattcaa
gttggtgaagagttttgttctagcaagtctgaagatttacaagaatcgataaaaaaacaa
agcgaaaactattttctaaactatcacgcacaacgcctagaggaacttaaaatattttta
gaaaatgaaatgtgggaaatctgtccagtgaagtcgtctttttatataatgcaattacag
gagttcaaaccattccgctactcaatgaaaactttcaaattcaatccacaaactagtccc
acaaccatgaattactccaccaattcgacggaatgttcttctacccactctttagatggc
agtagtattatcggaaactattttattcgctttgccgaacatggtactcccttcgattcg
ggtttggatgaaatcgtaatagatgaggacattatggtaacggaaaatgatggttcggga
tattactcagaagagagcgatgacaatgacgatttggaaaatgagtatgtggaagaatta
aacaatttaagacacgtaaatagtaaagaaagaaaagacaaaacgcagccgaacaatcct
gtattgaccaacacttctttaaccgtgctgcgacagatgggaaaatatattcaaatgtcg
cgtctcctgaaacccatagcgtttcgtattatttcctgtatgaatcaactgttcgactac
tacttatattcagtacatttattttttacagcagacttggttgtttccagtaccaatttg
tattcacaagagcttaacatgacactacaaagaatctcaaatgatctgatattagaaaat
gtaataatagatgaggaaaatcagggtcgtgacggtagagtttgtaaaccttccatttct
cctatgacagaattgaaaaatccagaaaagctcaatggtctagctgagagaatcgttgca
gtggaaagtttggtatttttgtccaaacaatttgaatttttacaggaatatttggattac
ctggtgcctcaaaattttaaaggagtactacagcaattttttctccaaactatagctagc
gctcctgatttaaggaatccggtgtacatggcagtcgtagctcaagcttttgatttaaga
caaattttaaccagtatgtccaaaataaattgggaagtgagggacgttagatcgatgcac
aattcttatgtggacacattgttaagagaagtacaaatatttacgttaagattggaggaa
atagcaataaaagttccaatatcgacggaagcgtatcataatatatggagaaatgttgca
catattgtgacacacacgttggtacaaggattttctgaagccaagaaatgtacaaatggt
ggtagagctctaatgcagttagattttactcaatttttgactaaatttgaaaaaatatcg
tcgttaaaaccagtgcctcataaagagtacgttgaaaactatgtgaaagcgtactactta
cctgatattgagttggaaaaatggataagagaccataaggaatattcttccaaacacatg
ttaggtttagtgagctgtgcatgtcaaaacaataagaaaactagacaaaaacttctacaa
gtgattgaagacatagaaaaaaataaatttcctaggtaa
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