Diabrotica virgifera virgifera (western corn rootworm): 114329009
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Entry
114329009 CDS
T09922
Name
(RefSeq) protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114329009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114329009
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114329009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
114329009
NCBI-ProteinID:
XP_028133821
UniProt:
A0A6P7FDR4
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Position
9:complement(189434901..189476802)
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AA seq
668 aa
AA seq
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MARHRDIRNMDYSDDYDGYDDVYGHSVDDDFFESPSNKQFIYNRDMSQRSSEGDIKEEDE
QEAELSDSDRAKLTSCIAQINTTLESVNISRNDLVNIIIKSKFDVERSINTILEDSQYRT
ATIEKVVTQPEIVQTPQIEQTKVISSTPKTVTNITKGFDLPQKGSFTPRSQSPASGKAFT
PRSQSPASGKIFTPRSQSPASGKVTPVNNHTLDFAEEVKQAKGRDSKFDPQQLYQKERGD
EKEHLYMVVIGHVDAGKSTLMGRLLCELGQVNQKVLHKYEQESRKLGKQSFMYAWVLDET
GEERNRGITMDVGRFQFETKTKAVTLLDAPGHKDFIPNMISGAGQADVALLVVDATRGEF
ESGFDHGGQTREHALLVRSLGVSQLAVAINKLDTVSWSPERFNEILKKLKAFLKQAGFKE
SDVTFVPCSGLTGQNLVKKPTESELLQWYDGPCLLDVIDKFRSPDRPISKPFRLSINDVF
KGTGTSFCVSGRVETGTLSVGDKVLVCPNREAAVVKSLAIEEASKTVVFAGDQVTVALSG
VEMQNVFIGNILCDPQSPVQVASKFLARIVVFNVTVPITKGFSVVLHHQSLVEPVIVSKL
ITQLNKSTGELVKKHPRFLGNNTSAIVEIQVSRPIALELYSECKELGRVMLRVGGVTIAA
GLITQIIL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacacagagatattagaaatatggactattcagatgactacgacggctacgac
gatgtttatggacattctgtggatgatgatttttttgaatccccgagcaataaacagttc
atttataacagagacatgtcacagagaagttccgagggggacattaaagaagaagatgag
caagaggctgaattatcagatagtgatagagccaaattaacatcttgtattgctcagatt
aatacaaccctggagtctgttaacatttctaggaatgatttagtcaatattataataaaa
tcgaagtttgatgtagagaggtctataaacacgatcttagaagactcacaatatagaaca
gctactattgaaaaagtagttactcaaccagaaatagttcaaactcctcagatcgaacag
acgaaggtgatctcctccactccgaaaaccgttaccaacatcacgaagggttttgatctg
ccacaaaaaggtagcttcactcccagatctcaatctccagcatctgggaaagccttcacg
cccagatctcaatcccctgcgtctgggaaaatcttcactcctagatcccagtcgcctgct
tctggtaaagttacgccagtcaataaccatactttggactttgccgaggaagtgaagcaa
gccaaaggcagagatagcaagtttgatccacagcagctgtaccaaaaggaaaggggagat
gagaaggagcacctgtatatggttgtgattgggcatgtcgatgctgggaagagtacgttg
atgggcagacttctctgtgaattggggcaggttaatcaaaaagtattgcacaaatatgaa
caagaaagtagaaaattaggaaaacaaagttttatgtacgcctgggttttagacgaaacc
ggagaagaacgtaatcgtggtataacaatggacgttggtcgatttcaatttgaaaccaaa
actaaggcggtaacactgttagacgcacctggtcacaaggacttcattcccaatatgatt
tccggagctggccaagccgacgtagcccttttggttgttgatgcaactcgaggcgaattt
gaatccggtttcgatcacggaggacaaacgagagagcacgctttactcgttagatctctc
ggagtatctcaactggctgtggccatcaacaaactggacacggtttcttggtcaccggag
agattcaacgaaattttaaagaaattgaaggctttcctgaagcaagccggattcaaagag
tctgatgtcacgtttgtaccttgtagtggattgactggacagaacttggtgaagaaacct
acagagagtgagctgttgcagtggtatgacgggccttgtttattagatgttatagataaa
ttccgttccccagataggcccatttcgaagccctttagactttcaatcaatgatgttttc
aagggtactggtacttcgttctgcgtctcaggaagggtcgaaactggtacgctaagcgta
ggcgacaaggttctcgtatgccccaacagagaagcggccgtggtaaaatcgctggcgatt
gaagaagcctcaaaaacagtcgtgtttgcaggtgaccaagtcacagtggcgctatctgga
gtagaaatgcagaacgtcttcataggaaacatcctctgtgatccccagagtcccgttcag
gttgcgtctaagttcctggctagaatagttgttttcaatgtgacagtacctattacaaaa
ggattttccgtggtgctacaccaccaatctttagtagaaccagtaattgtgagtaagctg
attacgcaattgaataaaagtactggagaactggtgaagaagcatcctaggttcttaggt
aacaatacaagtgccattgtcgaaattcaagtgtctcgacctatagctcttgaattgtat
agcgagtgcaaggaattggggagagtcatgcttagagtagggggtgtaactattgctgct
ggacttattacacaaattatactgtag
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