Diabrotica virgifera virgifera (western corn rootworm): 114329052
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Entry
114329052 CDS
T09922
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114329052
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114329052
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
UBA_N4BP1_C
Lipoprotein_21
RuvA_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114329052
NCBI-ProteinID:
XP_028133867
UniProt:
A0A6P7FG30
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Position
7:197248210..197432339
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AA seq
645 aa
AA seq
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MSNVVVGLVRIKQSCTQLLRENLDRISVLFSAVLSEKCFSQDKSSDHTIFEVLITVPDNT
ERTLSPDFVTRLQKYVDEICVEGCLGAVAGEDSSYDSDYEVDTPSSATQASARHQDVSRT
TSDTLAAEYAEYVQSTPEISAGYTARVEFALKLGYTEKLVQAALQKLGPSPTQNELLAEL
IKLGAQKGSSCDSSPSESTLDMTAFQIEAIEGTQSLRPIVIDGSNVAMSHGNKEIFSCRG
IKICVDWFKSRGHKDITVFVPKWRKESPRPDNLIRDQDILAELEKERLLVFTPSRLVGGK
RMVCYDDRYILKLAAQTDGIVVSNDNYRDLCQENAEFRKVVEERILMYSFVNDHFMPPDD
PLGRSGPTLDNFLKCQPKKGDPPPPCPYAKKCTYGNKCKYHHPERGPLPHKSVTERLSEH
AQRHLQAREGDIRKTPLGRTRSNIPPPKEPQHAVVSKSRSVDNVGASYIQSQPPTLQENL
HKKLQRQLTLNPGADPRLGVRYPAVPPPHTQPSAAGQLPGLTAAPPSSAFMNPPPGWDVH
QHVTRIASAPDSYRPWPPQQHPQHRHMQRISSCSDTQLNMWPPVWSQGSSHHLASSPVQE
DRRKLHYHLAAIFPEEQVTQAMQMYPDETNPQKICAAILSMFPKT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgtagtcgtcggtttggtgcgaataaaacaatcatgtacacaattgttgcga
gaaaatttggacaggatttccgtgttattttcggccgttttaagtgaaaagtgtttttcg
caggacaaatccagtgaccacactattttcgaagtactgattaccgtgccagataataca
gaaagaactttaagtccggattttgtaactagactgcagaaatatgtagacgaaatctgc
gttgagggatgcttgggagcagtggccggcgaggattcgagttacgattcagattacgaa
gtcgacactccttcctctgctacacaggcatcggccaggcatcaggatgtctctcgaacg
accagcgacacactcgctgccgaatacgccgaatatgtacagtccacgccggaaatatcc
gccggttatacagccagggtagaattcgctctcaagcttggctataccgaaaaattagta
caagctgcactacaaaaactggggccttcgcccacacaaaacgaattgttggcagaactg
atcaaattaggggcacagaagggcagttcttgcgatagcagtccatcggaaagtacctta
gatatgacagcgtttcaaattgaagcgatcgaaggaactcaatcgctacgtccaatagtt
atagatggtagtaatgtagctatgagtcatggtaacaaagaaatattctcctgtagaggc
atcaaaatttgcgtagactggttcaaatctcgcggacataaagacataacagtgttcgta
ccgaaatggagaaaggaatcacctcggcccgataatctcattagagatcaagatattttg
gctgaacttgaaaaagagagactgttagtatttactccttcgcggctagtaggtggtaaa
cggatggtgtgctatgatgatcgatacattttaaaattggcagcccagactgacggcata
gtagtaagcaacgataactaccgagacctctgtcaagaaaacgccgagtttcgcaaagtg
gtagaagagcgcattctgatgtattcattcgtcaacgatcacttcatgcctcccgatgat
cccctgggccgatcgggtcccacgttagacaatttcctgaaatgccaaccaaagaaggga
gatcctcctccaccgtgtccgtacgcgaaaaaatgtacctacggcaataaatgcaagtat
catcatcctgagagaggacctttgccccataagagtgtaacggagagattgtcggaacat
gcacaaagacatttacaggcgagggagggtgacatccgaaaaactcctctgggtcggact
cggtcgaatattcctcctcctaaagaaccccagcacgccgttgtctccaagagtcgcagc
gtagataatgtaggtgcttcctatatccaatctcagccaccgacgcttcaagaaaacttg
cacaaaaagctgcagcgacagctcaccttgaatccaggtgccgatccacgattgggcgtg
agatatccagcggttcccccgcctcacacacagccaagtgctgcaggtcaacttccagga
ttaactgcagctcctccgtcttcggcatttatgaatcctcctccaggttgggacgtacat
cagcacgtgacaagaattgcttccgcgcctgattcttacaggccatggcctccacagcaa
catccacaacacagacatatgcagagaatatccagctgttccgatactcagctaaacatg
tggcctcccgtttggtcgcaaggcagctcccatcacttagccagctctcccgtccaagaa
gaccgtagaaagttgcactaccatctggcggccatctttcctgaagaacaggtaacgcaa
gcaatgcagatgtatccggatgagacgaatcctcaaaagatctgcgctgctatactttcc
atgtttcccaaaacataa
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