Diabrotica virgifera virgifera (western corn rootworm): 114329097
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Entry
114329097 CDS
T09922
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114329097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dvv04121
]
114329097
Enzymes [BR:
dvv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114329097
Ubiquitin system [BR:
dvv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114329097
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114329097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
zf-C3HC4_2
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
zf-RING_2
zf-RING_UBOX
Beta-prop_HPS5
zf-C3HC4_3
Beta-prop_CAF1B_HIR1
zf-C3HC4_4
Beta-prop_WDR75_1st
RING_XB3-XBAT31
Beta-prop_IFT140_1st
zf-RING_5
Beta-prop_DCAF12
zf-RING_10
zf-rbx1
Beta-prop_SCAP
DUF1664
WDR90_beta-prop_4th
Sina_RING
zf-C4H2
KIF9
Motif
Other DBs
NCBI-GeneID:
114329097
NCBI-ProteinID:
XP_028133914
UniProt:
A0A6P7FD19
LinkDB
All DBs
Position
7:241841419..241872930
Genome browser
AA seq
651 aa
AA seq
DB search
MASSRDGRSSSASSHSGSNIPQNRPSIRTPKRPRPTTSNALDEKNSDFLCPVCFNLIEEA
HVTKCGHTYCYNCIVKTIETQKRCPKCNLNLSLEEIFPNFLLNELIKKHKLRLNGYEALG
LTRDSSGEFTATVDGLRDFVASESQNLTLPDVNVMLEVLTQRKQLLEAESCAAQNKLLLE
FLKHLLLQKKERQTQIAKEICIIEQDIEQVGKKIKEVHSKCPTLEEVERTAAGASETDAS
AVNAMKKEMIEIIDNIGRKEEDTNTSLAMRRRRMHAYFDDFVECYFCHRSKEMFFGKEVT
DKTKSASEINVGLDLFRESLIKFSTYNSLRVLATLNYSSDLFNNSTIVSSIEFDKDNEFF
AIAGVTKRIKVFEYGGVIKDIVSVHYPCVEMVSRSKISCVSWHTYHKSTLASSDYEGTVT
IWDASTGQRTKTYQEHEKRCWSVDFNCVDTRLIASGSDDARVKLYSLNEEHSIATLEAKA
NVCCVKFNPKSSSHLAFGSADHCVHYYDLRNMKEAVNVFKGHKKAVSYVKFLNSEEIVSA
STDSQLKMWSINSPYCLRSFVGHVNEKNFVGLATDGEYVACGSENNALYVYYKGLSKKLF
NYKFEAVEGVLEQERREDDMNEFVSAVCWKQSSNVIVAANSRGIINVLELV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagtcgtgatggcaggagcagttctgcttcgtctcacagtggttccaatata
ccgcaaaaccgaccgtctattcgtaccccgaaacgcccacgtcctaccacaagtaacgct
ttagatgagaaaaactctgattttctatgtccagtgtgtttcaatttgatcgaagaggct
cacgtcactaaatgtggccatacttactgttacaattgcatagttaagactattgaaacg
caaaaaagatgtcctaagtgtaatttaaatctaagtttagaagagatatttccgaatttc
ttgttgaatgaactgataaagaagcacaaacttcgtttgaacggatacgaagctcttgga
ttgacaagagacagttccggtgagtttactgctactgtcgatggattaagagatttcgtg
gctagcgagtctcagaatctaacacttccagatgtgaatgttatgttagaagtactcact
caacggaaacaacttttggaagctgaatcgtgcgctgctcaaaataaacttctgttagaa
ttcctcaagcacttgctccttcagaaaaaagaaaggcagacacagatagctaaggaaatt
tgtattattgagcaagatattgagcaggttggcaaaaagatcaaagaagtgcatagtaaa
tgtcctacgctggaagaagtagagaggacggccgctggagcttcagaaacagatgcttca
gcggtaaatgcgatgaaaaaggaaatgatcgagattatagataatattggcagaaaagaa
gaagatacaaatacttccctagccatgaggcgtagacgaatgcacgcatactttgacgat
ttcgttgaatgctacttttgtcatcgttctaaagagatgttctttggtaaagaagtcact
gataagacaaaatccgcctcagagattaacgttgggttggatcttttccgagagagcttg
atcaaattttccacgtacaattctctacgagtactcgccacattaaattactcgagtgat
ctatttaataattcgactatagtgtccagtatagagtttgataaggataacgaattcttt
gccatagccggtgtaaccaaacgaattaaggtgtttgagtatggtggagtcattaaagat
attgtcagcgtccactacccatgtgtcgaaatggtatcccgatcaaaaatatcgtgtgtc
agctggcacacgtaccacaaaagtaccctcgcctccagcgactacgaaggtaccgtaacc
atatgggacgcctcaaccggccagaggacgaagacttatcaggaacacgagaagcgttgt
tggagtgtagattttaactgtgtagatactagactaatagcatcgggatctgacgatgca
agagttaagctgtattctttgaatgaagagcattctattgctacgttagaggccaaagca
aacgtttgttgtgtcaaatttaaccctaaaagttcgtcacatttagcattcggtagtgca
gatcactgtgttcattattatgatctaagaaacatgaaagaagcagtcaacgtttttaaa
ggacacaagaaagctgtgagttacgtaaagtttttgaatagcgaagaaatagtaagcgcg
tcgactgattctcagttgaagatgtggagcattaacagtccgtattgtttgagatcattt
gtgggccacgtcaatgagaagaatttcgtcggcttggctactgatggagagtatgtggcc
tgtggctcagaaaacaacgccctctacgtgtactacaaaggtctgagcaaaaaactgttt
aactacaaatttgaggctgtagagggcgtattggaacaggaaagaagggaagacgatatg
aatgaattcgtatctgcggtatgttggaagcagagctcgaatgtgattgttgcagctaat
agtagaggaattatcaatgtcttagaactggtgtag
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