Diabrotica virgifera virgifera (western corn rootworm): 114329314
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Entry
114329314 CDS
T09922
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114329314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
114329314
Membrane trafficking [BR:
dvv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114329314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
zf-RING_5
zf-RING_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
zf-RING_11
zf_RING_Vps8
TPR_VPS8_2
zf-RING_Vps41
Clathrin
zf-C3HC4_2
Cnd1
Beta-prop_WDR3_1st
WDR55
Beta-prop_THOC3
zf-rbx1
Rtf2
VPS18_RING_C
HRI2_3H
Motif
Other DBs
NCBI-GeneID:
114329314
NCBI-ProteinID:
XP_028134161
UniProt:
A0A6P7FEJ5
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All DBs
Position
7:complement(243748579..243801958)
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AA seq
1170 aa
AA seq
DB search
MGSESEDVHVEDSDESLLDFKEIDDLECDIPQVAPPSLENILWDMESEASDSASLHSFQS
MTNKFHSMLYHCVLQGVSSQISSAADRVNAGSPTVITNSLNYVAVGTSHGYILAFDCQQN
LCWCSHDTSTIDQGAVSAISFNLESTRLLVGYERGFISMIDALTGDILRRLPDAHAPQTA
VLLLRFTFLSNLALCGDSSGCVFSLSFSRRLGVRSWNSKCLFSGARGEVCVFEPLVRGHD
LNFLNNNVLVAMATLSKVIVISVRPKLKVYYSQQLPRISTSLPLISWQLVSVGKSFQPVL
AWGRGNELHYTRVVTHGYNNNRITLLPLRKVQVPYTMNSLHWLGTRHLAILDTSENLRLV
EVRNQRELEVLEISNAGLVYNSAHFKALAVGGGVSEAFALAGERACYNSLSSRGDQLLVL
GTRAVHMIKLRTWSERLFYLSDQGRWAEALNLATAEGSSKEKFAIPLINKYLENINLNPI
DKESLTAAINCCIKLGKIDILCNELYEAISTDQSKKDWYYTLLTDQICSGSLTVLSPLIA
QQLVRYLEERDCETLENVLLSLDISCLDLHQVLKICKKLKMYNAWIHITTGTLKDYTSPL
TEFLCDFTPDNHKLGNILLVYVSSCLAGLGYPSGNIPDNEAARVKFDVLRCLETTHSIKY
NPDEPIYPYLRALLKYNTRDCLNVVELAFSQPEFSGEMGLLQRQRLVQILMQIVKPGDFS
DSQVINLSCFVARMVASNNISLDNHVLDSAIKSLTEIGNSLSIRDRSEREQAWLDLLNLN
KMNHLKTSHLLKLALESKCYKVAERLYEMQGDYSSILNCYLHDPVRKYEVFSYIFKYISV
SERLVREQFLVCFKDLVAISAKKTVEIVTEFFQSVLEQLCDILESDPNLQYDFLSEIVQT
DLKLTPQLSEKYLDQLCVRNKSQVCNYLQSSNCRSEEALAITRKYEVHEAVALLLESSGE
WMEALELFLEHEMVDAAVSLCIRGVEHLSPEDSQSLWLKLLQTRNSISGLSLRHLLHAAA
PHVPPAQMLNLVSNASFGDVRGLVQGILNDYAYDINMLTTTFKLLGKDLHLGLVKVLSSK
GRGTAVSNLVCTLCQKILLYRKELDSNESFYVWNCGHCFHSACIKGAEVNDACPQCRHKG
AMLPKIKRLTNKEDDNRVNHQSRPDLEGHF
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgggatcggagagcgaagatgttcacgttgaagactcagatgaatcccttttggatttc
aaagagattgatgatttggaatgtgacatacctcaggttgcccctccatcactggaaaat
atcctgtgggatatggaatcggaggccagtgatagcgcatctttacattcttttcagagc
atgactaataagtttcattctatgctgtatcattgtgttctgcagggtgtttcttcccag
atttcgtcagcagctgatagagttaacgcagggtcaccaacagtaataacaaatagctta
aactatgtagcagtgggaacatcacacggatacattctggcattcgattgccaacagaat
ttgtgttggtgttcccacgataccagcacgatcgatcagggtgcagtttcagccatatca
tttaatttggagtcaaccagacttttggtgggttatgagagaggattcatttcaatgata
gatgcattgacgggcgatattcttcggagattgccagatgcacatgctcctcaaacagca
gtgctgttgctaagattcacatttctcagcaatttggctttatgtggtgactcatcagga
tgtgtattttctctttcgtttagtagaagactgggggtccgatcatggaattccaagtgt
ctgttttcaggtgctagaggagaagtatgtgtttttgagccgctagtgagaggacatgac
ttgaattttctcaacaacaatgttttggtagctatggcgactctatcaaaggtaatagtg
atatctgtgcgcccaaagttaaaagtgtactacagccaacaactacctcgaatatcaact
tctctccccctaatatcctggcaactggtctccgttggcaaatcattccagccagttctg
gcttggggcagaggcaatgaactacactacaccagagtcgtcacgcacgggtacaacaac
aataggataacgttgcttccattgcgcaaagtccaagtgccttacactatgaactctctg
cattggctgggtacgagacacttggcgattttggacaccagcgagaacttaagattagtc
gaagtgaggaatcagcgggagctggaagttttggagatatctaatgcaggtttggtgtac
aattcggctcattttaaggctctggctgtcggtggaggtgtcagcgaagcgtttgcctta
gcaggtgaacgcgcctgttacaatagtttatctagtcgaggagaccagctgttagttttg
ggcacgagggccgtgcacatgatcaagttgagaacctggtccgaaaggctcttctacctc
agcgatcaaggtagatgggcggaggcgctcaatctagccaccgccgaaggatcgagcaag
gagaaatttgccataccgttgataaataagtatttggagaacatcaatttgaatcccatc
gataaggagagccttacggctgctatcaactgttgcataaagttgggaaagattgatatt
ctgtgcaacgaactgtacgaagccatctccaccgaccaaagcaaaaaagactggtactac
acactgttaaccgaccagatctgctccggatctctgacggttctatctccactcatagct
caacaattagtaaggtatttagaagaaagagactgcgaaacgttagaaaatgtgctatta
tctttagatatatcgtgcttagacttacatcaggttctaaagatttgtaagaagttgaag
atgtataacgcttggatacacatcactactggtactctcaaggattacaccagcccgttg
actgaatttctttgtgattttactcctgataatcataaattaggcaatattttactagtc
tacgtttcgtcttgcttagccggtctcggctacccaagcggaaacataccagacaatgaa
gctgctagagtaaaatttgacgttctgaggtgcctagagacgactcattctatcaaatac
aatccagacgaacctatttatccgtatttgagggccttattgaaatataatacgagggac
tgtttgaatgtcgtcgaattggcgttttctcaacctgagttttccggagaaatgggcctt
ttacagagacagaggctggttcagattttaatgcagattgttaaacctggagatttttct
gatagccaagtcatcaatctgtcgtgtttcgtagcaagaatggtagcgtcaaataatata
tccctcgataatcacgtattagattcggcgatcaaatctcttacagaaataggtaactct
ttatctataagagatagatcggagcgagagcaagcgtggcttgatttgttgaatttaaac
aaaatgaaccatttaaaaactagtcatctacttaagttagcgttagaatccaaatgctac
aaggtagcagaacgtttatacgaaatgcaaggcgactattccagcatcttgaattgttac
cttcacgatccagtgcgtaaatacgaagtattcagttatatttttaagtacattagtgta
agcgaaagactcgtccgagaacaattcctagtgtgtttcaaagatctagtcgcgataagt
gctaaaaagaccgtagagatagtgactgaatttttccagtcggtgttagaacaactttgt
gatatattggaaagtgatccaaaccttcagtacgactttcttagtgaaatagttcaaacg
gaccttaagttaacgcctcaattgtcggagaagtacttagatcagttgtgcgtgaggaat
aagtcgcaagtttgtaattatcttcagtcgagtaattgtaggagcgaggaagctctagcg
attacgaggaagtatgaggtccatgaagctgtggcgttgcttttggagtccagcggggaa
tggatggaggctttagagttgtttttagagcatgagatggtcgatgctgctgtcagtttg
tgtatacgaggcgtagagcatttatcacctgaagattcccagtcgctgtggttaaaattg
ctccaaactcggaatagcatctcaggattatcactcaggcatctcctacacgcagctgct
ccacacgtacctcctgcacagatgctcaacttggtatcgaacgccagttttggagatgtg
aggggattggtgcaaggcatattaaatgattatgcgtatgacattaatatgcttacaacc
acgtttaagttgttaggtaaagatttgcatttaggtttagtgaaagtcctgtcgtcaaaa
ggcagaggaacagcagtgtccaatctcgtatgcacactgtgtcaaaaaatactcctgtac
agaaaagaactcgacagcaatgaatcgttctacgtatggaactgcggtcattgtttccat
tccgcgtgtattaagggtgctgaagtaaacgatgcttgtcctcaatgtagacataaggga
gctatgttaccaaaaatcaagagacttacgaataaggaagatgataatagagtcaatcat
cagagtagaccagacctcgaaggtcatttttga
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