Diabrotica virgifera virgifera (western corn rootworm): 114329548
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Entry
114329548 CDS
T09922
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114329548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114329548
03036 Chromosome and associated proteins [BR:
dvv03036
]
114329548
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114329548
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114329548
PBAF complex
114329548
GBAF(ncBAF) complex
114329548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114329548
NCBI-ProteinID:
XP_050497260
LinkDB
All DBs
Position
10:complement(12992320..13081278)
Genome browser
AA seq
981 aa
AA seq
DB search
MLSVGPKMDGGPNIKYFEAPETLTAFEAVKNWLQKNGKKYVQNEPITNKTLSATAVQFMQ
FQEDFLGKNTQKPPMTRIPIKYFLDFKPGGGLCHMLLAAYKFKSEHGWRKFELPAGKNHS
VCDEVKQDFTSFTKAIIKVEIERNGNVSKLERVYEMFQSMEKALITAKLYSLPIVFIKPE
LDKAVAQKVKEIIRKRNGQIVETEETATHIIYGPVDPLKDEYGRPVTKRDKMVMMHWYYF
PNSFDTWVNLETAGLENLTVENNPSPHSGAWRICSTWVYETDQYNEWMSEEDYEVDENGV
KKVHPRLMSVEDLMNPSDERSKKNKGKRKRSPSPPSKIGKRKSGRSPAVGKKTRPEDPES
EDLTKDMEEPTPEPNIVEVTPSPTPSTNPPTKKDHELQPLKGGSITDIEENEERNNEDSQ
TGKNSDTNTQDDGQEDNVTEQTHHIIIPSYSAWFDYNSIHEVEKRAMPEFFNGRNKSKTP
EIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTESR
PTAMGPPPTSHFHILSDTPSGLQPVNPPKTPQPSAAKTFLDLDKSETKIKPEPATEMSNF
GLKLDQYVKKPAVLRNKSAASLTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDEC
ILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAA
KSAMNEFASIKDEVPASVMDAHLKNVEASNADGKFDPAANLALTGIAGTVPDKEEEDKIK
KEDKDDEKSGEDKKNGDSQEDKASDKLKSEASDSEKEEKMDISDGKTEKVVKDSEMQSAA
AAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEY
QRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAAQQVPASHSTPPAESGPSTT
PTPPSPQASAVASPQAPHHHI
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgtagggccaaaaatggacggaggtccaaatataaagtattttgaggcacca
gagactctcacagcattcgaagcagttaaaaattggttgcagaaaaatggtaaaaagtat
gtacaaaatgaaccaattacaaacaaaacattatcagccacggcagtacagtttatgcag
ttccaggaggattttctgggaaagaatacacagaaaccaccaatgactagaattccaata
aaatacttcttggatttcaagcctggaggtggtctttgccacatgctattagctgcttat
aaatttaaaagcgaacatggatggcgaaaatttgaactccctgctggaaagaaccacagt
gtatgtgatgaagtgaaacaggattttaccagttttactaaagccattattaaagtggaa
atagaaaggaacgggaatgtctcgaaactggagcgagtgtatgaaatgttccaaagtatg
gaaaaggctctgattactgcaaaattgtattctcttcctatcgtttttataaaaccagaa
ctggataaagcagtagctcagaaagtaaaagaaattatccgcaagcgcaatggtcaaatt
gtggaaactgaagagaccgctactcatattatatatgggccggttgatccactcaaagac
gaatatggaagacctgtcacgaaacgagacaaaatggtaatgatgcactggtattacttc
ccgaattcatttgatacatgggtaaatttagaaacagcaggcttggaaaatctgaccgtg
gaaaataatcctagcccgcattctggtgcttggcgtatttgttctacttgggtctatgaa
actgaccagtacaatgaatggatgtcggaggaagactatgaagtagacgaaaatggcgta
aagaaagtacatccgaggttaatgtctgttgaagatctaatgaatccttcagatgaacgc
agtaagaaaaacaaaggtaaaagaaaacggtctccttcgcctccgtctaagattggcaaa
cgaaaaagtggtagaagccctgctgtgggcaagaaaactagaccagaggatcctgaatct
gaagacttaacaaaagacatggaggaaccaactccagaaccaaacattgtggaagttacg
ccttctccaacaccatcaaccaatccacctacaaagaaagaccacgaacttcaaccctta
aaaggaggttcaattacagatatagaagagaatgaggagagaaataatgaggattcccaa
actggcaagaacagtgacaccaacacacaagacgatggacaagaagataatgtcacagag
caaacgcatcacattattattccatcgtattctgcgtggttcgactataactctattcat
gaagttgaaaagcgtgcgatgccggaattttttaacggtagaaacaaatcgaaaactcct
gagatatacttagcatacagaaatttcatgatcgatacctaccggcttaacccaactgaa
tacataactagtacagcatgtagacgcaaccttgcaggagatgtttgtgccataatgcgg
gttcatgcgtttttggagcaatggggtttgatcaactaccaagtagataccgaatccaga
ccgacggccatggggcctccgcctacttctcattttcatattctttcagataccccgtct
ggtctacagccagttaaccctcctaaaacacctcaacctagcgcagccaaaactttcctt
gatctcgataagagtgagactaagattaagccagaacccgctacggaaatgtccaacttt
ggactgaagttagatcagtatgttaagaaacctgctgttttaagaaataaaagtgctgct
tctctgacaagagactggacggaacaggagacgctgcttctcctagaaggattggaaatg
tataaagatgactggaataaagtgtgtgaacacgttggttctcgcacacaagatgaatgc
atacttcatttccttagattaccaattgaagatccgtatttagaagatccagaagctgga
ggtgctttaggacccttagcctatcaaccaatcccgtttagtaaagctggaaacccgata
atgtcaaccgtcgccttcttagcgtctattgtcgatccgcgagtagcagcagcagctgct
aaatcagctatgaacgagtttgctagtattaaagatgaagtgccagcgtctgtgatggac
gcacatcttaaaaatgttgaagcttctaatgctgatggtaaatttgacccagccgcgaac
ttagctctcactggtatagctggcaccgtacccgataaagaggaagaagataaaattaag
aaagaggataaggatgacgagaaatctggcgaagacaaaaagaatggtgatagtcaggaa
gacaaagctagtgataagttaaaatcggaagcatcggatagtgaaaaggaagaaaaaatg
gatatatcggacggtaaaacagaaaaagttgtaaaagatagtgaaatgcagagtgcagca
gcggctgcattagctgcagctgcagttaaagcgaagcatttagctgctgtggaggaaagg
aagatcaaatctctggtagcgctgttagtagaaactcaaatgaaaaagcttgaaattaaa
ttgcggcattttgaagaactagaaacaaccatggagagggaacgcgaagggcttgagtat
cagagacaacaacttataacagaaagacagcaattccatttggaacaattaaaagcagca
gagtttagagctagacagcaagcacatcaaagactacaagctgaacaaggccagtgggct
gcgcagcaagtacccgcttcccactcaactcctcctgccgagtctggaccaagtacaacc
cccactcccccatccccacaagcttcggctgtagcctccccccaagcccctcaccaccac
atttga
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