Diabrotica virgifera virgifera (western corn rootworm): 114329787
Help
Entry
114329787 CDS
T09922
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114329787
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
114329787
3'-5' decay
Other 3'-5' decay factors
114329787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
UvrD-helicase
AAA_19
AAA_30
ResIII
PAM2
zf-CCCH
AAA_22
PhoH
DUF4028
TPR_ESP1
zf-C2H2_2
TPR_2
AAA_7
zf-C2H2_jaz
TPR_12
zf-C2H2_4
AAA_5
ANAPC3
PIF1
AAA_16
Motif
Other DBs
NCBI-GeneID:
114329787
NCBI-ProteinID:
XP_028134803
UniProt:
A0A6P7FP99
LinkDB
All DBs
Position
9:complement(204279489..204331509)
Genome browser
AA seq
1457 aa
AA seq
DB search
MTPATMELQAQEYLKQKNWVQAIELLNKLLIINQNTVEQVVSYLTDRAECFLELNNHQAV
IVDSKNIIKLCPDQTNYNVCLARKRLIHSLYMIKRFTEADMAARDWLILIQESDVNKEIK
AVLESLLGNFINCTNAKQKTINLIKILDANFTNGFSNVKVERPSIVSCVYCNVTFAEKSE
LRAHCQTEAHEMTVMSDDGRDWRWRPPPRGVTHECYLPCDNWRDTGCCRYGMQCVRAHGE
EELAEWRERFRYREMRMQRAREKELFGKSYTEEILEKWAQSSNPNALMCNKIDDVEDQCS
CPLSVTVSSKNSLHEWTFYIKTKRPLKAVALLQDTHRNHFFLASIFIKNCKIDLRSNQEW
ISPMLHQESMLPVEYRVKVVFTTGIFGTFRQSVVFDFTSEPVLVKHMCVDVVPDPDLEKI
NEIRKEISLSISERWTIHNSDIVPFHSTVENANPNEEWEKRLRSMYPCPHADTFLLSHAT
VAEKKFTKNNYRERMHELLFIEEMARYELVAQYNLSAKLKLALSYILSPNSMAASTAKYS
NNGELFASVSLGKVLSEDTSEGRLILMHCNSVYLSLSVSESPLRRRVYEAWIEDKGKNTI
YLRLSAVTVKELGLTKDSDVQVDIQFQLNRIPYCEWHYTLDKMTNFKMIFPETYLEPSIP
WSPSRQWSRTLDSRLNIKQKEAVNAITTPLCVQLPPILVIGPFGTGKTFTLAQAIRELIK
DSPNRILLCTHSNSAADLYIKDYLDQWVENGEESARPLRIYYTKRWVSTVHPIVQKYCLI
KNNGTYRSFEIPTLEDIMKHKIIVVTLSTSVYLSAMGLPQGFFTHILLDEAAQAIECETV
TPLAVAHDSTRIVLAGDHMQLGPDIFSTFAKERNLHISLLERLYDHYPSHFPCKILLCEN
YRAHESIIQFTSESFYDQKLISSSKQPCHSKYYPLTFFTTRGEDIQDKNSTAFYNNSEVY
EVVERVSELKRNWPPEWGSYTDQSIGVVTPYADQVFRIRSELRKRRVDNVCVERVLNVQG
KQFRAIILSTVRTRKTCTNDISRTEVDYGFLSNSKLLNTAITRAQSLVAVVGDPIALCSL
GRCSKVWERFIQICNDSNSLFGITWTQLKLQLDGIELKKIYTLNPLAPEFIPRKYKELGM
VPSVAKVEASLPKEVVPPPPPPTTLVSQIPPAVISPFPIQDLRFFPQLLYPPQQPRPFLF
NLIPPTLTNGFTQPIPIVNPSLVVPPRQQVVTSLPKAVPVPQGAQSIPVQSPSKPHGNSS
QAGSNKLIQFMNNVHFPEANVLNDCINLLPQNMSLADMLLQPPSLQERWYNYLRETTGPE
AAEKFKYLLHTTNQKGSKVLDKNIFERSTPSSCESPTFSWYDSPTNQINFNKPVYMTENV
STEHHNGVLKENVQFETFENGMSEEELQRHINEEFANLSMDNTDVNEVFKAFTHKNECVQ
MNGGPNVTGPKFYKYFQ
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggctacaatggaattgcaggcacaggaatatttgaaacaaaaaaattgggtg
caagctatagagttgttgaataaactccttataatcaaccaaaatacagtggagcaagtc
gtttcgtatcttactgatagagcagaatgcttcttagagttaaataatcatcaagctgtt
attgtggattccaaaaatatcatcaaactttgtcctgatcaaactaattataatgtctgc
ttggctagaaaaaggcttatacattctctttacatgattaagagattcacagaagccgat
atggccgctagagattggctaatactgattcaagagtcagatgtaaataaagaaattaag
gctgtattagaatcgcttctaggtaatttcataaattgcacaaatgctaaacagaagact
ataaacttgataaagatactagatgctaatttcactaatggattttcaaatgtcaaggtc
gagagaccttctatagtctcctgcgtgtactgcaacgtaacatttgcagaaaagagtgag
ttgcgtgcccattgtcagactgaagcacacgaaatgacagtgatgtcagacgacggacgc
gattggcggtggaggccaccaccgaggggtgttacccacgagtgttatctaccgtgcgat
aactggagggatacgggctgttgccgatatggtatgcagtgtgttcgtgcccacggagaa
gaagaattggccgaatggagagagagattccgctatagagagatgagaatgcaaagggct
agggagaaggaactgttcggtaaatcttataccgaagaaatattggaaaaatgggcgcaa
tcttcaaaccccaacgctctaatgtgcaacaaaatagatgacgtagaagaccaatgctct
tgtccactatcagtaacagtatcatctaagaatagtctccacgaatggactttctacata
aaaacaaaaagaccgctgaaagctgtagctcttcttcaagacacgcatcgaaaccatttc
ttcctagccagtatttttatcaaaaattgcaaaatagatctgagaagcaaccaggaatgg
atatcgcctatgctgcaccaggagtccatgttgccggttgaatatagggtcaaagttgtc
tttaccactggtatctttggaactttcaggcaatcggtggtattcgatttcacatctgaa
ccagttctagtcaaacacatgtgcgtagacgtcgtccccgacccggatttggagaagatc
aacgagatccggaaagaaatatcactatcgatctcagagaggtggaccatccacaactca
gacatagttcctttccattcgaccgtggaaaacgccaacccaaacgaagagtgggagaag
aggttgaggtcgatgtatccctgccctcatgctgatactttcctgctatctcacgcgact
gttgctgaaaagaagtttacgaagaataattacagagagaggatgcacgagttgctgttc
attgaagaaatggcaaggtacgagttagtagctcaatacaacttatccgcgaagctgaaa
ctggctctcagctacattctatcgcctaacagcatggccgctagcaccgcgaaatattcc
aacaacggcgagctattcgcttctgtgagtcttggcaaagtattatccgaagacacttcg
gaaggaagattaatactcatgcactgcaatagcgtctatctatcgctttctgtatcagaa
agcccgcttagacgacgagtttacgaagcttggatagaagacaagggaaagaacacgatc
tatttgagattaagcgctgttactgtgaaggagttgggtttgacgaaggattctgatgtc
caggtggatatccagttccagttgaacaggataccatactgcgagtggcattatacgttg
gataagatgactaattttaagatgatttttccggagacctacttggaaccaagtatacca
tggtcgccttctagacaatggtctagaacgctcgacagcagactaaacatcaaacaaaaa
gaagcggtaaacgccataaccacgccgttatgtgttcaattaccaccgatcttggtcatc
ggccctttcggtaccggaaaaacgtttactttagcccaggcgatcagagagctcatcaaa
gactcccccaacaggattctgttgtgtacacattcgaacagcgcggccgatttgtatatc
aaagattatttggatcagtgggtggaaaacggtgaggagagcgcgagacctctgaggatt
tactacacgaaacgttgggtgtctactgttcatccgatagttcaaaagtactgtttgatt
aaaaacaacggaacataccggtcttttgagataccgactttggaagacatcatgaagcac
aaaataatcgtcgtaactctttctacatcggtatatctctccgccatgggccttcctcaa
ggattcttcacgcatattctcctagacgaagcagctcaggcgattgaatgtgaaacggtt
actcctttagcagttgctcatgacagcacaaggattgttcttgctggtgatcatatgcaa
ttgggaccggatatattctcgacgtttgccaaagaaaggaatctccatatatctctactc
gaacgattgtacgatcactaccccagtcactttccttgcaagattttgctatgcgaaaac
tacagggcacacgaaagtattatacaatttacttctgaatcgttttatgaccagaagttg
atctcaagcagtaaacagccatgccatagtaaatactacccgttaacattcttcaccacg
cgcggagaagatatccaagacaagaactcaacagcattctacaacaactccgaagtgtac
gaagtagtggaacgcgtatcagaactgaagcgaaactggcccccagaatggggctcttac
accgatcagtccataggagtggtcactccatacgccgaccaagtattccgaatcagatct
gaactgagaaaacgcagagtggacaacgtgtgtgtggaaagagtgcttaacgtccaagga
aagcagtttcgagccattatcctctcgactgtgcgtacccgaaagacttgcaccaacgac
ataagtcgtactgaggtcgactatggctttctctcgaattctaagttgttgaatactgct
atcacgcgagcacagagcttggtggctgttgtaggtgatcccattgctctttgttcctta
gggagatgcagtaaagtgtgggagaggtttattcagatctgtaacgatagcaatagcttg
tttggaattacttggactcaattgaagttacaactggacggcatcgagttgaaaaagatc
tacaccctcaaccctctagcgcccgaattcattcctaggaaatacaaagaattaggcatg
gtaccgagcgtggccaaagtcgaagctagtcttcccaaagaagtagtcccacccccgcca
ccacccactaccctagtatcgcaaattcctcccgcagttatctcaccattccctatccaa
gacctgagattttttccccaactcctataccctccccagcaacctcgtcctttcctcttc
aacctcattcctcctaccctgacgaacggcttcactcaacccatcccgatcgtcaatcct
tccttggtggttccaccacgtcagcaagtggtgacttctttaccaaaggctgtacccgtt
ccccaaggagcgcagagtattcctgttcagagtccgagtaagccgcatgggaactcctcg
caggctgggagtaataaattgatacagttcatgaacaacgttcattttcccgaagccaat
gttctgaatgattgcatcaatttgttgccgcagaatatgtcgctggcggatatgttgctg
cagcctccaagtctacaggagcgatggtataactatcttagagaaaccacaggtcccgaa
gccgcggaaaaattcaagtatctcctgcacaccacgaaccaaaaaggttccaaagtatta
gacaaaaacatattcgagcgttccacgccctcgtcctgcgaatctcccaccttcagctgg
tacgacagtcctaccaaccaaatcaacttcaacaagcccgtgtacatgacggaaaacgtc
tccacagaacaccacaatggcgtcttgaaagaaaatgtccagtttgaaacgtttgagaac
ggcatgagcgaggaagagctgcagaggcacataaacgaggagttcgccaacttgagcatg
gataacaccgacgtaaatgaggtgttcaaggcgttcacgcataaaaacgagtgtgtacag
atgaacgggggccccaacgtgacgggccccaaattttataaatatttccagtag
DBGET
integrated database retrieval system
