Diabrotica virgifera virgifera (western corn rootworm): 114330504
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Entry
114330504 CDS
T09922
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dvv03009
]
114330504
Ribosome biogenesis [BR:
dvv03009
]
Eukaryotic type
90S particles
Other 90S particles
114330504
Pre-60S particles
Other pre-60S particles
114330504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_IPO5
C_GCAxxG_C_C
Motif
Other DBs
NCBI-GeneID:
114330504
NCBI-ProteinID:
XP_050498963
LinkDB
All DBs
Position
2:complement(196753579..196873163)
Genome browser
AA seq
1317 aa
AA seq
DB search
MGKFRSKLKGQTKGKRWPKGQSSSSNPETKKYRDLAKSRFFQENLGPSSLTSDALKKHDA
VQSYIPKAPESINMEEDTESSVGTQSSFGTMKSFASEWSDCSNMSFNRFLTVFRSDSALH
KEMLAILAAITEVIKENGGSETPTEYFGSLMTTLEQVYNAENKNEDQVTAVLALLNMGIK
TVPEAVLKKHFNDITLKILHILSDYADSENNTIMKSIFGILGSLLKIQELAVWNQPSTIQ
IFNALLNPFCIHTKPKWRKAAQHAVMSIITTGNFVKEGSSNPAADRAAEFCEQTLDSCMG
STSGVVLVSSVQAGQTTILHVLGLLKEIISKFSKHHIKTCCETILKLMTLNYPIVTSCGM
QVLYALFSAQTAVIPGKLNAQLITALYEYQPSLSDVQPTQAWVTVMQQAHVHLADVDVAL
AMATLPKIIDIFTQLWLSEKAEIMTSATHALEILLKDALVNGCSSKELVGQHRSKVERCI
QTIQLCLGYQYNASWHQVLHIVSVLFEVTGANCSDMLLGLLTNLAELRDSYKFSYNNELE
HAVGAAIRSMGPEVVLEVITLKKPNGDLNIDRSWLLPVLKENIKCSTLEYFVKGILPLAL
YCHRRSAQLAQNNDGIGAHSSELLYLQLWNLLPCFCSQPKDIKDSFKTVAKVMGTAISDK
KELRLAVMAALRRLISYAKESENQEDLQEISRFDKNYLPILFNVYTTKPIGTDEEGQRLA
ALDTIKLYLSIARPELTQQLFNNAIERLNSSSDEPEDHFIKESILDLIRALVPYQNAQNV
EILYQQCIQNLPEIKNNKEQKKAYRLLEEVCGSESEGCQTFVKSNRKEVQRLLMKSLNSA
AVSSKGARLRCLNYLIKAQPQLDNESKLIKSAIPEAILCCKDINEKCRTTAYDLLNTIGN
LLLEHDKMQQFLELIIAGLAGTPQLVSCTVLALASILHHFSGTLGMDNIRIIVDNVCTLA
GSPTREIVASCLSFTKVYITTLPSPMVASSLEHLMKGLCNMTEDCKRHFRLKIRDILDRL
VRKYGCESLTPFVPNTDTVMYKRLRNLRKLNARKKRRKDEDREDESDDEEFTVKAKPKSV
EEILADSDSEFEDMETDEPKVKNKKQAKTWIEEDPDNIVDFIDPSVISKITATKPGLVQP
TLEKKKPEKDRGFKTAPDGRLIIKDDSSSDSDDDKKLKFSDDSDDDDDTQSKVETVLLTD
RKRKRSNASVKSGFSSVSSQPPMKYKTGGVGIHRSLGASTSSVKSGFSSAGSEYKSRKAS
GDVKKKGKLDPYAYLPLKRTTLNKRKKNKAAGQFKHIVKAAKAGALKGAKAKRNKNK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatttagaagtaaattaaaaggacaaactaaggggaagagatggccaaaagga
cagagttccagttcaaatcctgaaactaaaaaataccgagatttagcaaaatctcgcttt
ttccaagaaaatttaggtcccagtagtttaacgtcagatgctctaaagaaacacgatgct
gtgcaatcatatattccgaaagctccagaatccattaacatggaggaagatacagaatct
tctgttggaacacaatcttcttttggtacaatgaaatcttttgcttcagaatggtcagat
tgtagtaacatgtcattcaatagatttttgactgtatttagatcagattcggcattacac
aaagaaatgttggcaatattagcagccataacagaagtcataaaagagaatggaggatct
gaaacacctactgaatactttggttccttgatgacaacattagaacaagtttataatgca
gaaaataagaatgaagatcaagtaacagcagtattagccttgttgaatatgggcataaaa
acagttccggaagctgttttaaagaaacacttcaatgatatcacattaaaaattttgcat
atattaagtgattacgcagattcagaaaataatacaataatgaaatcaatatttggcatt
ttgggatctttgctaaaaatacaagagttagcagtttggaaccagccaagtacaattcag
atcttcaatgccttactgaatccgttttgcatccacactaagcctaagtggagaaaagcg
gcacagcatgctgttatgtctataataacaacaggaaattttgttaaagaaggttcttcc
aacccggctgctgatagagcagcagaattctgtgaacaaactctggactcttgtatggga
agcacatctggtgtagtccttgtatcttcagtccaagctggccagactacaattctccat
gttcttggtttgctgaaggaaattattagtaaattctccaagcatcatattaagacttgc
tgcgaaactattctaaaattgatgaccctcaattatcccattgtaacctcatgtggcatg
caggtcctttatgcattgttttcagcgcagactgccgtcataccaggaaaacttaatgct
caattgatcactgctctttatgaatatcagccatccctttcagatgtacaacccactcag
gcttgggttacagtcatgcagcaagctcatgtccatcttgctgatgtcgatgttgctcta
gcaatggcgaccttgcctaaaataattgacatctttactcaattgtggctctcagaaaag
gctgaaataatgacttctgctactcatgctttggaaatattattaaaagatgctctcgtt
aatggatgtagctccaaagaattagtaggacagcacagatccaaagttgaaaggtgtatt
cagacaattcaactatgtttgggataccaatataacgcttcttggcatcaagtgttacac
attgttagcgtgctatttgaggttacaggcgcgaactgcagcgatatgctactaggacta
cttaccaacttagcagaattaagagattcatacaaattcagttacaacaacgaactagaa
catgctgtaggagcagccatcaggtctatgggaccagaggttgttttggaagttattact
ctgaagaaacctaacggagatctcaatatagacagatcgtggttgcttccagttcttaaa
gaaaacatcaaatgctcaactttggagtatttcgttaaaggtattttacctttagctctt
tactgtcatcgtagatctgctcagttagcacagaataatgatggaataggagcgcatagt
tcagaattactgtatttacaattatggaatcttctaccttgtttctgtagccagccaaag
gatatcaaggacagttttaagactgttgctaaagttatgggtactgcaatttctgataag
aaggaacttcgtttagcagttatggctgcattaagaaggttaatttcttatgccaaagag
tcagaaaatcaggaagatttgcaggagataagtagatttgacaagaactatttgccaata
ttgtttaacgtttatactaccaagcctattggtactgacgaagaaggtcaaagattggct
gcattggatacgataaagttatatttatcgattgcaagaccagaattaactcagcagctc
ttcaataacgccatagaacgattgaatagtagttcagacgaaccagaagaccattttata
aaagaatccatcctggatttaattcgtgctttagtaccataccaaaatgctcagaatgtt
gaaattttatatcaacagtgtattcaaaacttaccagaaataaagaataacaaggaacag
aaaaaggcttacagactattggaagaagtatgtggaagtgaatcagaagggtgtcagaca
tttgttaaaagtaatcgaaaggaggtgcaacgtctactcatgaaatctctcaactcagct
gcagtttctagtaaaggcgcaagattacgctgtcttaattacttaattaaggcccaacct
caattggataacgaaagtaaactgatcaaatctgctattcccgaagccatactgtgttgc
aaagacatcaacgaaaaatgtaggactacagcatatgaccttttaaatacgattggaaac
ttattgttggagcacgacaaaatgcaacaatttttagagttgattatagccggtttagct
ggtacaccacaacttgttagttgtacagtcttagcactagcctcaatcttgcatcatttt
tcaggtactctaggaatggataatatcaggataattgtggataatgtttgtacattagct
ggatctcctacgagagaaatagttgcatcatgtttaagttttacaaaagtgtatattacg
acactccctagtcccatggtagcttcatcattagaacatttgatgaaaggattatgtaac
atgacggaagactgcaagaggcattttaggctaaaaattcgtgacattttggatagacta
gtcagaaaatacggttgtgaatctcttactccttttgtaccaaataccgacacagtaatg
tacaagaggcttagaaacttacgaaaactaaacgccagaaagaagaggaggaaagacgaa
gatagagaagatgagagtgatgatgaagaatttactgtaaaggctaaaccaaaaagcgtc
gaagaaattttggcagattcagattcagaattcgaagatatggaaacagatgaacccaaa
gttaaaaataagaagcaagctaaaacatggattgaagaagatcctgacaacattgttgat
tttattgatccaagcgtcattagtaaaatcactgctaccaaacctggactcgtccaacca
acccttgaaaagaaaaagcccgagaaagaccgaggattcaaaacggctccggacggcagg
cttataataaaagacgattcgtcgtcagatagtgacgatgacaaaaaactcaaattttct
gatgactccgatgatgatgatgatactcaaagtaaagttgaaacggtactgctaacagat
cgtaaacgcaaaagaagtaacgctagcgtcaaaagtggttttagttcggttagttctcaa
cctcccatgaaatataagactggaggtgttggtattcacaggtctttgggagctagcact
tcttccgttaaaagcggatttagttcagcaggttctgaatataaatctaggaaagcgtct
ggagatgttaaaaagaaaggaaaactggatccctatgcatatttacctttgaaacgtaca
accttgaataaaaggaaaaagaacaaggctgctggtcaatttaagcatatcgtcaaagca
gcaaaagcaggagctttaaaaggtgccaaggcaaaaaggaataaaaacaaataa
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