Diabrotica virgifera virgifera (western corn rootworm): 114330784
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Entry
114330784 CDS
T09922
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dvv01009
]
114330784
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114330784
04131 Membrane trafficking [BR:
dvv04131
]
114330784
03036 Chromosome and associated proteins [BR:
dvv03036
]
114330784
Enzymes [BR:
dvv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114330784
Protein phosphatases and associated proteins [BR:
dvv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114330784
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114330784
Membrane trafficking [BR:
dvv04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114330784
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114330784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114330784
NCBI-ProteinID:
XP_050519593
UniProt:
A0A6P7FSP9
LinkDB
All DBs
Position
10:complement(118869898..118915007)
Genome browser
AA seq
889 aa
AA seq
DB search
MGDTDKSGGDPGASTATKSPGGRQKLSQFLAEKRKRKVELGQPVASLKDPYELANNCITV
APSKTGFIQEESSSHYCIWDPLYPENIERVACAERRINALELKDRCVLVPRLHFSTEVLL
KKHTPELLEKLKSTKELSGEDLRTFSSKYDAVYFTQQTYDSAIAAAESVLSLTQEVMTGN
LRNGLALVRPPGHHAMSNEFCGYCFINNVAIAAEMALSSGHAKRVLIVDYDVHHGQATQQ
MFYDRKDVLYFSIHRYEQGTFWPNLRESDFDYIGEGVGTGYNINIPLNATGLSDSDYLAI
ILNVLLPVAYQYNPDLVLVSAGYDASIGCPEGEMLVTPAFYGHLITLLSGLANGRLVVCL
EGGYFPESLAEGVVCSLKALLGDPCYPLSIKEVHPEVINVINSAIYYLRRTWDGLNLMDS
FSYPKNGVPLKACLSINSETEHLSKVIYRFTPQPTTVYETMGFYPVRSEMEILKYTKMIE
DLRTAYASIYNVSHEVGYVYDELLLKHKSKITTGKEVPERPERITEIIKTFDKFGLLERL
KHIKDDQVDCEAWIQKVHHVQYIDRILRLQDLPVQPDWYRNEFTADCVLKCVSCILTLIT
NIQRNIVRSGVAVVRPPGHHACHDDGSGFCFFNNAVIAANYLIDVHKYSRILIVDFDIHH
GNGTQDLTFERNDIMYISIHRFDSAKFFPFFKKGNVDHIGTGPGEGYNINIPFNSGNKTD
ADYWAVWHKLVLPLAYSYDPQFVIVSAGFDAAYFDPLGNGYKVSPEMYGQFIQTLKPLAS
GKQLILLEGGYHLESTALSMTMCVKALLGDPLPVPRFDEKIGTETRATIKKVLDTHRNKW
RFLQVSKNIANFSCTDAQYQSLETALEEEINARGSVESFRKKIPAVIKN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacagataaaagtggtggtgatccaggagcttccacagcaaccaaatcacct
ggaggaagacaaaagttgtcacaattcttggctgaaaaacggaagaggaaagttgaactt
gggcaaccagttgcatcgctcaaagatccttacgaactggcaaacaattgtataacagtt
gctccaagtaaaactgggtttattcaagaggaaagctcaagccactattgtatatgggat
cctttataccctgaaaacattgaaagagttgcttgtgctgaaagaaggattaatgccttg
gaattaaaagatcgatgtgtactagtaccaaggttacatttttctacagaagtattgttg
aagaaacatacacctgaattattagaaaagctcaaatcaactaaggaactttctggggaa
gatttacgaacattctcgtctaaatatgatgctgtgtattttacccagcaaacatatgat
tctgcaatagcagctgccgaatcagtattatcattaactcaagaagtaatgactggcaac
ctcagaaatggattggccttggttcgtccacctggtcatcacgcaatgagtaacgaattt
tgcggatactgtttcataaacaatgtagctatagcagctgaaatggcactttcatcaggc
catgccaagcgagtcttgattgttgattatgatgtccatcatggtcaagcaacacaacaa
atgttttatgacaggaaagatgttctgtatttctcaattcaccgttatgaacaaggaaca
ttctggccaaacttaagagagagtgactttgactacattggtgaaggggttggaactgga
tataatataaatattccattgaatgcaacagggctaagtgattctgactaccttgccatc
atattaaatgtgcttcttccagtggcataccaatacaatcctgacctagtattagtatca
gcaggttatgatgcttctataggatgtccagagggtgaaatgttagttactcctgcgttt
tacggccatctaattacactgctatctggattagctaatggaagacttgtagtgtgcctg
gaaggtggatattttccagagtctttagcagaaggagttgtttgctcattgaaagctcta
ctaggcgatccatgttacccacttagtattaaagaagtacatcctgaagtaataaatgtg
ataaacagtgctatttactatctacgtagaacttgggatggtttgaatcttatggattct
ttttcctacccaaagaatggtgtacctcttaaagcatgtcttagcataaacagtgaaacc
gagcatttgtctaaagtaatatatcgttttactcctcagccaactactgtatatgaaact
atgggattttatcccgtgaggagtgagatggaaattttgaagtacacaaaaatgatcgaa
gacctacgaactgcttatgcctcaatctacaatgtttctcatgaagttggatacgtatac
gatgaacttctgctcaagcacaaatctaaaattacgacaggtaaagaagttccagagaga
ccggaacgtatcacggaaataataaagacttttgataaatttggactgctagaacggttg
aaacatattaaggatgatcaagttgactgtgaagcatggattcaaaaggtccatcatgta
caatacatagacagaatcttgagactgcaagaccttcctgttcaacctgattggtaccgg
aatgaatttactgctgattgcgtattaaaatgtgtatcttgcattcttacactgattacc
aatatccagaggaatatagttaggtctggagtagcagttgttaggccacctgggcaccat
gcgtgccatgacgacggatcagggttctgtttctttaataatgcagtgatagcagcaaat
tatctcattgatgtacataaatattcacgaatattgatagtagacttcgatattcatcat
ggaaatggaacccaagatctcacgtttgaacgtaatgacataatgtatatttccatacat
cgctttgatagcgctaaatttttcccattttttaaaaagggaaatgttgaccacattggc
actggcccgggcgaaggctacaatattaacatcccatttaattcggggaacaagacagat
gccgactattgggctgtctggcataaacttgtacttcctttggcctactcatacgatccc
caatttgtgattgtatcagctggatttgacgccgcatattttgatcccttgggaaacggc
tataaagttagtcctgaaatgtatggacagtttattcaaacgctcaaacctctagctagc
ggaaaacagctaatactcctggaaggaggataccacctcgagagtacggctctttccatg
actatgtgtgttaaagcactactaggtgatcctttaccagttccaagatttgatgagaag
ataggaacggagactcgagcgaccattaaaaaagtcttagatactcatagaaacaaatgg
agatttttacaagttagcaaaaacattgcgaacttttcatgtactgatgctcaataccaa
tcactggagacggccttagaagaagaaatcaacgcaaggggatctgttgaaagttttagg
aaaaaaattccggcggtcattaagaattaa
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