Diabrotica virgifera virgifera (western corn rootworm): 114331534
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Entry
114331534 CDS
T09922
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04140
Autophagy - animal
dvv04142
Lysosome biogenesis
dvv04145
Phagocytosis
dvv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
114331534
04142 Lysosome biogenesis
114331534
04140 Autophagy - animal
114331534
04148 Efferocytosis
114331534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
114331534
Membrane trafficking [BR:
dvv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
114331534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
TPR_Vps41
VPS18_solenoid_2nd
Clathrin
VPS3_C
WD40_CDC20-Fz
DUF5751
Beta-prop_WDR19_1st
VpsT-like_REC
Beta-prop_RIG_2nd
Lambda_ea8_5
WD40_like
ASA1
Beta-prop_WDR3_1st
zf-Di19
B129_C2H2-zf
MSC6_N
Motif
Other DBs
NCBI-GeneID:
114331534
NCBI-ProteinID:
XP_050509895
UniProt:
A0ABM5KI76
LinkDB
All DBs
Position
6
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AA seq
844 aa
AA seq
DB search
MHEAYQVSSLLKVTHQVESIAAYDDNLLVGTRQGHLCMYSVLRNDDSCEVQLMRYNKSFS
KKPVQQLEVIQDQNLLVSLSDNLIQVHDLSAIHFTTLHQVQKSKGATVFTINIMKEQSMT
GEVVTLVRMAVAVKRKIQLYYLKNNEFLQLMDDINLNDIPKSMVWCQEAICIGYKGEYAL
LELNGKQSSLFPTSSTRLNEPCMTRVSDTTFALCRETQTVLVNVKGETERNKALRWSDIP
MTLAWDEPYALGILNDSIEVLTLEPNGLVQTLSDLPKVRFIVSAQRGVLYAASISQIWSI
QAVDIEKQRESLVAAKQFQLALKLTQMSKESEDEKQEKIHHIQTLLAYDLFHKKQFHESM
KEFLKLETDAYDVIRLFPDLLPQQQGTEVPEPARDLTETEHETSLLALIDYLTEKRHGLK
TTDVQANINASGNLSDKVTNKSTNQLLQIIDTTLLKCYLQTNDALVVPLIRLNRCHFVET
EKILKKMGKHNELIILYQTKGQHRRALELLQSEGSTERIVGYLQHLGSENMGLILDIADW
VLNESPEEGLKIFTEDVAEVESFPRPRILDFLLKSHKSVVIPYLEHVVHIWKDTNPLFHN
ALIHQYREKLVAEGPAGSEPTRKKLLQFLENSKQYTAENILSSFPTDILLEERAVILGRL
GKHEQAVTIYVRALGDIEKAEKYCKKVFENNVPGSQNVYVSLIKLILDPDSCPLSLPGLT
LSPKTAQPDVELALRLLQENANHMNPLEALFILPDNIPVSRLHKFLLVAMQKVTQERRNM
QLMKGLLYAEHLQCQEMKLKLQSQHVLVTEFNVCPVCRKRFGNQSALVRYPNGDVVHYSC
QDKK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagcatatcaagtttcgtctttattaaaagttacacaccaagttgaatcaata
gcagcttatgatgataatctacttgttggtacaaggcagggccatttatgcatgtacagt
gtgcttcgtaatgatgatagctgcgaagtgcaattgatgagatataataaatcgtttagc
aaaaagccagttcaacagttggaagtcattcaagaccagaatttacttgttagtctttca
gataatttgatacaagttcacgatctaagtgctattcatttcaccactctacaccaagtg
caaaaatccaaaggagccacagtttttactattaatattatgaaagagcaatcaatgact
ggcgaggtagttactttagttcgtatggcggttgctgtgaaaagaaaaatacaactgtac
tatttaaaaaataatgaatttttgcaattaatggacgacataaatttaaatgatatacca
aaatctatggtttggtgtcaagaagctatttgtattggctacaaaggagaatatgccctt
ttggaactaaatggtaaacaatcttcactgtttccaactagcagtactcgattgaatgag
ccgtgcatgactcgagtttctgatacaacatttgcactgtgtagagaaactcaaacagtt
ctagtcaatgtgaaaggcgaaacggagagaaacaaagctttgagatggtctgatattcca
atgacgttagcttgggacgaaccttacgctttaggaattttaaacgattctatagaggtg
cttactttggaacctaatggtctagtccaaactttgagtgatctaccgaaagtaagattt
atcgtttccgcacaacgaggcgtattgtatgcggcttccataagtcaaatatggagtatt
caagcagtagacatagagaaacaaagagaaagccttgttgctgcaaaacagttccaactt
gcattaaaactgactcaaatgtcaaaggaatctgaagatgagaagcaggaaaaaatccat
cacatccaaacattgctggcgtatgatctatttcacaagaaacaatttcacgaaagcatg
aaagaatttctgaaattagaaaccgacgcatacgacgttattcgattgtttcctgattta
ttgccccaacagcaaggaaccgaggttccagaaccagctagagatttaacagaaactgaa
catgaaactagtcttttagctcttattgattatttgactgagaagagacatggtttgaag
acaacagatgtacaggcaaatatcaacgcaagtggcaacctcagtgataaagtcaccaac
aaatccactaaccagttgcttcagatcatcgatacaactttactgaaatgctatctacaa
accaacgacgcattagttgtacctttgatcagattgaatcgttgtcactttgtcgagacg
gaaaagattctgaagaaaatgggaaaacataacgaactcatcatattatatcaaaccaaa
gggcaacacagaagagctttggaattgcttcaatctgaaggcagtacagaacgtatagtt
ggatatctacaacatttgggatctgagaatatgggtttaattctggatattgccgattgg
gtattaaatgagtcgcctgaagaaggtttaaagatttttactgaggatgtagcagaagtg
gaatcatttcctcggcctcgtattctcgattttctacttaagtctcataagtcagtagtt
attccttacttagaacacgtggttcatatttggaaagatactaatccgttatttcacaac
gcgttgattcaccagtatcgagaaaagttagttgctgaaggcccggcaggttcagagcct
acaagaaaaaagttgttgcaatttttagaaaacagtaagcagtacactgctgagaacata
ctaagcagtttcccgactgatatattgttagaggagagagccgttattctcggaaggctt
ggtaaacacgagcaagctgttacgatttacgttagagctttaggagatatagaaaaggct
gagaaatattgcaagaaagtttttgaaaacaatgtacctgggagccaaaatgtctacgta
tctctcataaaacttatcttggatccagacagctgtcctctttcgcttcctggtctgact
ctgtctccaaaaactgctcaacctgacgttgaattagctttgcgactattacaagaaaat
gcaaatcacatgaatcccctggaagctctcttcatacttccagataatattcctgtctct
agacttcataagtttttgctagtcgctatgcagaaggtcacccaagaaagaaggaatatg
cagttgatgaaaggattgctgtacgctgaacatttacaatgccaggagatgaaattaaaa
ctgcagagtcagcatgtgttagttactgagtttaatgtttgtccagtttgtaggaaacga
tttggaaatcaaagtgctttggtacggtatcccaatggagatgtagttcactactcgtgt
caagacaaaaaatga
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