Diabrotica virgifera virgifera (western corn rootworm): 114331805
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Entry
114331805 CDS
T09922
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114331805
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114331805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_EZ
ResIII
DUF1643
Motif
Other DBs
NCBI-GeneID:
114331805
NCBI-ProteinID:
XP_050515682
LinkDB
All DBs
Position
8:complement(227577302..227684020)
Genome browser
AA seq
1810 aa
AA seq
DB search
MTSSRLDRLFVLLETGSSSVTRSAAAKQLGEVQRLHPHELKTLLSRTATYLRSTSWETRI
AASEAIRHIVANVPQWNPQGVDIKEEEDGQSPSLSTIGRLRFSQFSMPTVLANSTHLMAS
EGKEFDLNDDPTMDSKERMAKQRQQLNARLGLNLAAQMGFDTSNLFTNEDLINNSDKMSS
VSVRKNVQEVICPTNKELSLREINRAKRKARQAVSKQRSRDNLDDNSSEEPEKKKPKTEL
KEEYTSQFDVELGDAGDWPLEWFCDQLSQDLFSCSWETRHGAATALREVLSVHGSGAGKA
TYLSSNQMDLCHQIWLEDMAIRLLCVLALDRFGDFVSDAVIAPVRETCAQSLCAVMKLMT
SQSCYEVLKILLQLMDHAEWEARHGGLLGLKYLLAVREDMIDSFLPESFPFILLGLSDPV
DDVSAVAASALIPVAEKLTDLVPERIPEVVTKLWDLLSEQDELAAACNSFMGLLAAVLNL
PKMQALLPAQPLNEVVPRLWPFLSHGTSSVRKATLQTLSTLTEKPKSGTAILWDAQLLQD
ALRHIYQRVLVEPNPDVRLVAEKVWYNLIENSRLVELLHAACPFITVWLYLCMQPVRLPF
DTNFLIHAKSHKKKSDALNSFDHTVVPPKMYIGGIETTSTLVREQNAIPVRCAASRMLGS
LSRYITKPAPGVDYATNGLENPIDSYVKVLMVHLNSKSALQRMVTGLVIAEWAKADKDVE
TCPLNLKTRLLECLNEFLYFDEIAHSFTRLAQETKDFLATLRHYKVPIPGNNENVLTLDQ
IEQVTGPETQSILVNIKMKPKVLESLEERRRNIHNSVSQTNKDQTRLSTSTMAAIAGAAV
MFRVIPEKFVSMVKPLMKSLNNESNEELQKIAAEHLSILIDQTRDRQNNPNERIIQHVSN
YLKSDPEYTPVIYKHQEEESSSQKDFLKPGNYNGIVTLNNQQRTAERAALKRCNSTGRGP
GRPPATDIPMDELFKEEDEAQKTNAILRRGGTQALVALVKHFGEHVPTAVPKLWELMIGR
LTESIDPFNFIAQDFYGKDEQAETILWSLQVLEVTVTSLHKSLLPEIMQKALIRLCVLLS
HPYRAVRHLASRCLATFAKLDSVRVMEMVVSIVLPKLGATDCDIDRQGAVEAITCIVEEL
KFDIIPYVVLLVVPLLGRMSDQNMCVRLMGTHSFATLVQLMPLDGGVPEPPALKGSILNV
RRDKEREFLHQLLTPSSIPDYHVPIPIEAELRSYQQAGVNWLAFLNKYKLHGILCDDMGL
GKTLQSICILAGDQYDREQRYKETKSPDCASLPSMVICPPTLTGHWVYEVEKFLKHKYLR
PLQYNGSPTEREKLRHKFRKFNLIVASYDIVRKDISFFSGIKWNYIILDEGHVIKNGKTR
TSVAIKALVANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFTARYSRPILASRDP
KCSPKEQEAGVLAMEALHRQVLPFLLRRMKEDVLDDLPPKITQDYYCELSPLQEQLYEDF
SKSQAHQTLQESISASGSSGSIHNTHIFQALRYLQNVCNHPKLVLNATHPHYQQINAKLQ
EKNSRLEDISHSAKLPALKQLLQDCGIGVNDNPDKESTDIVINQHRALVFCQLKAMLDII
EEDLFKKNMPGVSYLRLDGSIPPIHRHSVVTRFNNDPSIDVLLLTTQVGGLGLNLTGADT
VIFVEHDWNPMKDLQAMDRAHRIGQRKVVNVYRLITRGTLEEKIMGLQKFKLQTANTVIS
GENSQMETMGTDQLLDLFSHKSTSNGDLASGSGKSGVGGMKAVLDSLPELWDSRQYDDEY
DLSQFMSKLK
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagtaggttagatcgcctcttcgtgctgctggagaccggtagttcatcggtt
actcgttctgcagctgcaaaacagctaggagaagtgcagcgactgcatccgcacgaattg
aagacgctactgtccagaactgccacctatttgagatcaacttcctgggaaactcgaata
gctgcctcagaagcgattagacacatcgtagccaatgtaccacaatggaatccacaagga
gtcgatataaaagaagaggaagatggacagtctccgtcgctatctaccattggaagacta
cgatttagtcagtttagtatgccaactgtactagcgaatagtactcatctgatggcgtca
gagggaaaagaattcgacttgaatgacgatccaacaatggattccaaagaaagaatggcg
aaacaacggcaacagctgaacgctagattaggactgaatctggccgcacaaatggggttt
gatacgtcaaatctgtttaccaatgaagatctgatcaataattctgataaaatgagtagt
gttagtgttaggaaaaatgttcaagaagtgatttgtccgacaaacaaagaactgagcctg
agagaaataaatagagctaagcggaaagccagacaggctgtgagtaaacaaagatctaga
gataacttagacgataatagctccgaagaacccgaaaagaagaaacccaagactgaattg
aaagaggaatataccagtcagttcgatgttgagctaggagatgctggcgactggccgctg
gaatggttctgtgatcaattaagtcaagacttatttagttgtagttgggaaactcgtcat
ggggcagctacggctctgcgagaggtcctgtctgttcacggatctggagcaggaaaggca
acctatttgtcatcgaatcagatggacctgtgccaccaaatttggctagaagatatggca
ataagactgttatgcgttttggctctagacagattcggcgatttcgtatctgacgctgtg
atcgctccggttagagaaacgtgtgcgcaatcgttatgcgcagtcatgaaactcatgacg
tcacaatcgtgttacgaggttttaaagatacttctgcagctaatggaccatgcggaatgg
gaagctaggcacggaggtctcttgggattaaaatatctacttgccgtgagagaagacatg
atagacagttttctcccagaaagcttcccgtttatcctactaggactctccgatccagtc
gatgacgtgagcgcagttgccgcttctgcattaatacccgtggcagaaaaactgactgac
cttgtacctgaacgtatcccagaagtcgtcacgaagctttgggacttgttgtccgagcaa
gacgaactggcagctgcttgtaatagtttcatggggttgctggctgcggtattaaatctg
ccgaagatgcaggcgttgttgccagcgcaacctttgaatgaagttgttcccaggttgtgg
ccgtttttgagccacggaacaagttccgtcaggaaggcaacactgcaaactttaagtaca
ttaactgaaaaaccaaaaagtggtactgcgatcctttgggatgctcaactactccaagac
gctcttcggcacatctaccaaagagttctggtcgagcccaatcctgacgtacgcctcgtg
gccgaaaaagtgtggtacaatttaatagagaattccagactggtcgaattgttgcatgcc
gcttgtccgttcataaccgtttggttgtacctttgtatgcaacccgtacgactgcctttc
gatacgaacttcctcattcacgccaagtcgcataagaaaaaatcggatgcgttgaacagt
ttcgatcacacggttgtgccacccaagatgtacataggaggtatcgaaaccacttcaact
ctggttagggagcaaaacgctataccagttcgttgcgctgcctcaagaatgttaggttcc
ctttcccgatatattacaaagccagcaccaggtgtagattatgccactaatggtctggaa
aatcccatagactcttacgtaaaagttctaatggtccatttgaattcaaaatcagccctc
caacgtatggtaacaggtctagtcatagccgaatgggctaaagccgataaagacgtagaa
acatgtccccttaacctgaagactcgcttgctcgaatgcctcaacgagttcctctacttc
gatgaaattgctcatagttttacgcgtctagctcaggaaactaaagactttttggctact
ttacgtcattataaagtgcctataccgggcaataacgaaaatgtcctcacgctcgaccaa
atcgagcaagttactggcccggagactcaatcgattctagtcaatattaagatgaaaccc
aaggtattggaaagtttggaggagaggaggagaaatatccacaactccgtgtcgcagacc
aataaagatcagacaaggcttagtactagcacgatggccgcaatagcgggcgcagccgtt
atgtttagagtgatccctgaaaagtttgtatcaatggtaaagcccttaatgaagtcgctg
aacaatgaaagtaacgaggaattgcagaagatagcagcggaacatttatcgatattaata
gatcagactagagacaggcaaaataatcccaacgaaagaatcattcaacatgtcagtaat
tatttaaagagcgatcctgagtatactcctgtaatttataaacaccaagaggaagaaagt
tcttcccagaaggattttcttaaaccgggaaactataatggtatagttacactaaataac
caacaaagaacggccgaaagagcggctttaaagagatgtaacagcacgggacgaggccct
ggtagacccccagcgactgatattccaatggacgaactatttaaagaagaagatgaagct
cagaaaaccaatgcaattctgagacgaggtggtacccaagctctcgtggcccttgtcaaa
cattttggagaacacgtaccaacagctgtacctaaactgtgggaattaatgatcggtcga
ttgaccgagtccatagatccgtttaatttcattgctcaagatttttatggcaaggacgag
caagcggaaacaattttgtggtccttacaggttttggaggtgaccgttactagtctacac
aaatcgttgctaccggaaataatgcaaaaggctctaataagactctgtgttttgctttcg
catccttatcgagctgtaagacacttagcatcacgttgcttagccacatttgccaaactc
gattctgtaagagtcatggaaatggtggttagtatagtattaccaaagctaggagctaca
gactgcgatatagatagacaaggtgctgtcgaagccatcacctgcatagtagaagagtta
aaattcgacataattccttacgtagtactgttggttgtaccgttactcggtcgaatgtcg
gaccaaaatatgtgcgttaggctcatgggcacccatagctttgccacgttggtacagttg
atgccgttggacgggggcgtaccggaaccacctgcactaaaaggaagtattttgaacgtg
cgaagagacaaagaaagggaatttctgcaccagcttcttactccctcttcgataccggat
tatcacgttcctattccaattgaggcagagctgagaagttaccaacaggccggtgttaac
tggttggcatttcttaacaaatacaagttgcatggcattctgtgtgacgatatgggtttg
ggaaagacattgcagagtatttgtattctcgccggagatcaatatgacagagaacaacgg
tacaaagaaaccaaatctcctgattgtgcttcactaccatctatggttatttgtccgcct
actctcactggccattgggtttacgaagtggaaaaattcctcaaacacaagtatctacgt
cctctacagtacaacggatcacccaccgagagagagaaactgagacacaaatttcgaaaa
tttaatctgatagttgcctcgtatgatatcgttcgtaaggacatatcattcttctctggt
attaaatggaattacataatcctcgatgaaggacacgtcatcaaaaacggtaaaacgaga
acaagtgtagcgataaaggcgctggtagccaaccacagactgatcctgagcggcactccc
atccaaaacaacgtcctggaactttggagtcttttcgatttcctaatgccaggcttcctt
ggaacggaaaagcaattcacagccagatattcccgacctattttagccagtcgggatccg
aagtgttctcccaaggaacaggaagctggagtattagccatggaggcgttacacagacaa
gtattgccgtttttgttgcgaagaatgaaggaggacgttttggacgatttaccaccgaag
atcacgcaggattattactgcgaattaagtcctttgcaagagcaactgtacgaagacttt
tccaaaagtcaggctcatcaaaccctacaggaatctatttctgccagcggttcatcagga
tctattcacaatacacacatattccaagcactcagatacctacagaacgtctgtaatcac
ccgaagttggtactaaatgctacacatccgcactatcaacaaatcaacgccaaactacaa
gaaaaaaattcaagattggaagatattagtcattcagcaaagttaccagctcttaagcaa
cttcttcaagactgcggtataggcgtcaacgacaatcctgataaagaatcaactgacatt
gtcatcaaccaacacagagctttagtattctgccaactgaaggctatgttggacatcata
gaagaggatctattcaagaaaaatatgcctggcgtttcttatttgcgactggatggttcc
atacccccaatacatagacattcagtggttacaaggtttaacaatgatccctccatcgac
gtcctgttattaacgacgcaagttggaggactgggcttgaatctgacaggcgccgatacg
gtgattttcgtcgaacacgattggaatcctatgaaggatctacaagccatggatagagct
cacaggatcggccagaggaaggttgtgaatgtctacaggctgatcacaagaggaaccttg
gaagagaagattatgggattgcagaagttcaagctccagactgccaacaccgtgatcagt
ggcgaaaacagccagatggagaccatgggtaccgaccaattactcgacttgttctcacac
aaatcaacatcaaacggagatttggcttctggtagtgggaagtccggtgtaggcggaatg
aaggccgttttggattcgttgccggaactttgggacagtagacagtacgacgatgagtac
gatttgtctcaatttatgtccaaattgaagtag
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integrated database retrieval system
