Diabrotica virgifera virgifera (western corn rootworm): 114331997
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Entry
114331997 CDS
T09922
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03013
Nucleocytoplasmic transport
dvv03015
mRNA surveillance pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114331997
09122 Translation
03013 Nucleocytoplasmic transport
114331997
03015 mRNA surveillance pathway
114331997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114331997
03041 Spliceosome [BR:
dvv03041
]
114331997
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114331997
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114331997
Spliceosome [BR:
dvv03041
]
Complex C
Other components
EJC/TREX
114331997
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114331997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
114331997
NCBI-ProteinID:
XP_028137493
UniProt:
A0A6P7FX94
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All DBs
Position
6:complement(8273643..8299579)
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AA seq
425 aa
AA seq
DB search
MADADDLLDYEDEEQTEQTATETATTEVQKKGVKGTYVSIHSSGFRDFLLKPAILRAIVD
CGFEHPSEVQHECIPQAVIGMDILCQAKSGMGKTAVFVLATLQVIDPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPNIKVGVFFGGLPIQKDEETLKNNCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHEKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVA
LAQLLTEQNFPAIGIHRGMDQKERLSRYEQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSEEGDAKILNEVQERFDVNITELPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctgatgatctattagattatgaagatgaggaacagacagaacaaaccgca
actgaaacggcaactacagaggtacagaaaaagggtgtcaagggcacatatgtatcaata
cacagttctgggtttagagattttctgttaaaaccagcaattctcagagctatagtggac
tgcgggttcgaacatccttcagaagttcaacatgaatgtattcctcaagctgtcattggc
atggatattctgtgccaagctaaatccggtatgggaaaaacggctgtttttgtattagct
acactccaagtaatagatcctacagaaaatgttgtatatgttctcgtcatgtgccatacc
agagagttagccttccagataagcaaagagtacgaacgtttcagtaaatatatgcccaat
attaaagtaggggtcttctttggtggcttgcctatccagaaagatgaggaaacgttaaaa
aataattgcccgcatatcgttgtgggtactccaggaagaattttagcattggtcagatcg
aaaaaacttaatctcaaacatctaaagcattttattttggatgaatgtgataaaatgttg
gagttattagacatgagacgtgatgttcaagaaatatatcgtaacactccccacgaaaaa
caagtcatgatgttcagtgccaccttaagtaaagaaattagaccagtttgcaagaaattt
atgcaagatcccatggaagtatatgttgacgacgaagctaaattaacattgcatggtcta
cagcaacattatgtaaaactaaaagaaaacgaaaagaataaaaagttatttgagttacta
gatgttttggagttcaaccaggttgtcattttcgtaaaatccgtacaaaggtgtgtggcc
ctggcacaattactgactgaacagaacttcccagcgataggaattcacagaggaatggac
caaaaagaacgactgtcccggtatgaacaattcaaggatttccaaaagaggattctagta
gccacaaacttatttggacgtggaatggatatcgaaagagtgaacatcgtcttcaactat
gacatgcccgaagattctgacacttacctgcacagagtagcccgagctggacgtttcggt
accaaaggtctagccattactttcgtatcagaagagggagatgccaaaatattgaacgaa
gtacaagaaagatttgatgttaatattactgaattacctgacgaaatagatctcagttca
tacattgaaggacgataa
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