Diabrotica virgifera virgifera (western corn rootworm): 114332243
Help
Entry
114332243 CDS
T09922
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114332243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114332243
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114332243
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114332243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
114332243
NCBI-ProteinID:
XP_028137803
UniProt:
A0A6P7FYB4
LinkDB
All DBs
Position
9:complement(8898886..8902702)
Genome browser
AA seq
283 aa
AA seq
DB search
MSLCEAEKTFVLHGVEENFRVDGREREDYRPMELETDIVSHAFGSARLRLANTDVLVAVK
IEVDVPFPETPNLGKLEFFVDCSANATPDFEGRGGEDLAIAISNTLSSAYSSPLAFDLKK
LCILNGRKCWKIYVDILILECGGNLFDAVSLAVKAALWNTQVPLVKNVNIDGNNVEINVS
DELYDCKRLDVQNAPIMVTVCKIGEKCIVDPNAAEEQCSVGSVVVAVSGDKFSTVYQTGT
GSLHPTTLIESLQLGLSVAQRLDEALRGTLAEIKSDQDIGFLK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgcgaggctgaaaaaacgtttgtgctacatggagtagaggaaaattttaga
gtagatggaagagaacgagaggattacagacctatggaattagaaactgacattgtctct
cacgcatttggttcagcaaggctgagactagcaaatactgatgttctggtagctgttaag
attgaagttgatgtaccttttccggaaacacctaacttaggaaagctggaattcttcgtt
gattgttctgcaaatgctacaccagattttgaaggcagaggtggtgaagatcttgctata
gctatctcaaacactttaagttcagcgtactcttctccgctggcattcgatttgaagaag
ctttgtattttgaatggaaggaagtgctggaagatatatgtagatattttgattttggaa
tgtggaggtaacttgtttgatgctgtttcactagcagtcaaggctgcactttggaataca
caggttccccttgttaaaaatgttaatattgatggtaataatgttgaaattaatgtctcg
gatgaactgtatgattgcaagagactggatgtccaaaatgcacctattatggtgacagtt
tgtaagattggagaaaagtgcatagtggaccccaatgcagccgaagagcaatgttcagtt
ggttcagtggtagtagctgtctctggagataaatttagcacagtttatcaaacaggaaca
ggatcgttacatcccacaaccctcattgaaagtttgcagttaggcttgagtgtagcgcaa
agattggatgaagctttgagggggactttagcagaaatcaagtcggatcaggatattgga
tttcttaaataa
DBGET
integrated database retrieval system
