Diabrotica virgifera virgifera (western corn rootworm): 114332383
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Entry
114332383 CDS
T09922
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114332383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114332383
03036 Chromosome and associated proteins [BR:
dvv03036
]
114332383
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114332383
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114332383
PBAF complex
114332383
GBAF(ncBAF) complex
114332383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
PemK_toxin
Motif
Other DBs
NCBI-GeneID:
114332383
NCBI-ProteinID:
XP_050511747
LinkDB
All DBs
Position
7:102081680..102084489
Genome browser
AA seq
578 aa
AA seq
DB search
MEKLQRKRSASHQPHTRKICRNLSIAKKRRIKYSQNNDLVLIDHVNEDINVPSVSKIVEI
VPLEQNDQPNKEITTLQPLQSSLEENEMKDLNIADNSETKTQDYEQDRIVIDQEHHIIIP
SYSSWFDYHTIHAVEKRAVSEFFNGKNKSKTPEIYLAYRNFIIDTYRLNPTEYITSTACR
RNLAGDVCAIMRVHAFLEQWGLINYQVDTESKPTPMGPPSTTHFHILTDTPRDLKSINTP
WVNRTKNLMDLDKTKVRKPKPAAKMGNFGLKSDQYAKQSKSFSQKGITSVLGDWTDQETL
LLLEGLEMYKNDWNKVSDHVGSRTQSECILHFLRLPIEDPYLEGPDNGSALEPLTCEPIP
FSDMGSPIMSTVAFLASTVDPKVAAAAVKSAMHEFSTIQDAVITDTNVKTSSGNYGEASN
LKANGEADTILSDDYEGDNQKNEADGKSGEEQNHSNTVKEDEKMHMYTKNNEFTKHSEIQ
SAAAAVLATGAVKAKHLAAIEERRIKFFIAALLETQMKKLEIKLRCFEELNRTMETEIGR
LEYQRQQLIIERQELNMEKLKAAQIIRNQNQNTGYTTI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactacaaaggaaacgctctgcatcccatcaaccccacacaagaaagatttgc
agaaatctttctattgctaaaaagagaagaataaagtattcccaaaataatgacttagta
ttaatagatcatgttaatgaagatataaatgttccttctgtgtcaaaaattgttgaaatt
gttcccttagaacaaaatgaccaacccaataaggaaatcactacacttcaaccattacaa
agtagtttagaagaaaatgaaatgaaagatttgaacattgctgacaatagcgaaaccaaa
acacaagattatgaacaagacagaattgtcatagaccaagaacatcatattattattcct
tcttattcgtcatggtttgattaccataccattcatgctgttgaaaagcgggcagtatca
gaatttttcaatggtaaaaacaaatctaagacaccagagatatatttagcatatagaaat
ttcataatagatacatatcgcctcaatccaacagaatatataactagtactgcttgcaga
agaaaccttgcaggggatgtttgtgccataatgagagttcatgcttttcttgaacaatgg
ggattgatcaactaccaagtagatactgaatccaagccaacacccatgggtcccccatct
actactcattttcatattctgactgatactccaagagatcttaaatctattaatactcca
tgggttaacagaacaaaaaatttaatggatcttgataaaaccaaagttaggaaaccaaaa
cctgctgctaagatgggcaactttggattaaaatcagatcagtatgctaaacaatctaag
tctttcagtcagaagggtataacatctgtactaggagattggacagatcaggagactctt
cttcttctggaaggattggaaatgtataaaaatgattggaataaagttagtgatcatgta
ggttctcgcactcaaagtgaatgcattcttcattttcttagactgccaattgaagatcct
tatttagagggaccagataatggaagtgctttagaacctttaacttgtgaacccattcca
tttagtgatatgggaagtccaattatgtcaactgtagcatttttagcttctactgtagat
cctaaggtagcagcagcagctgttaaatcagctatgcacgaattttctactattcaagat
gcagtaattacagatacaaatgtgaaaacttctagtggtaattatggggaagcatctaat
ttaaaggcaaatggtgaagctgacactatactaagtgatgattatgaaggtgacaatcaa
aaaaatgaggcagatggaaaatctggtgaagagcaaaaccattcaaatacagttaaagaa
gatgaaaaaatgcacatgtataccaaaaataatgagtttacaaaacatagtgaaatacag
agtgcagcagctgctgtattagctactggagcagttaaagctaaacatttagctgcaata
gaggaaagacggataaaattttttatagctgcacttctagaaactcaaatgaaaaagctt
gaaatcaaattaagatgctttgaagaactaaacagaactatggaaacagaaataggaagg
cttgaataccaaaggcaacaacttatcatagaaagacaagagttaaacatggaaaaacta
aaagctgctcaaataatacgcaatcaaaatcaaaacacaggatatactacaatttga
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