Diabrotica virgifera virgifera (western corn rootworm): 114333354
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Entry
114333354 CDS
T09922
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114333354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114333354
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114333354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
114333354
NCBI-ProteinID:
XP_028139016
UniProt:
A0A6P7FRV8
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Position
2:11874938..12015726
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AA seq
914 aa
AA seq
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MADKPFKALNLDITQQQEFVRYFRNLPEKAPSTIRFFNRTEFYSLHGDDTTVAVECTCAR
VKYMGMEPQLSYVTLSKGQFEIFLRELLLVRQYRVEVYVKKATKSNQWSLEYKGSPGNLS
QFEDLLFENTSIKFNNAVMCLKVFANRLLAVACINISECKFEVCELTDNDTFSELESLTA
QIGPKECILPTGSTPDLVTIKKLLERTGIMVSQVKNTDFTDEDLGQDLNRLLYFAEGQQR
NAFSFHETNLKNAMCCLQAGIKFFEIGQDEKNFNQFKISTLDTKRFVRIDNAALYALNVL
PKPTPGTTKISKSTKTSCLKGLLDYCITAQGSRLLEQWIKQPLKDYLAINERLEIVETIA
KNSDVRTQLTKDWLPRVTDLIPLSRKVASKKARLQDCYKVYQVVSTVPSIIKVLKETNNK
FVKDMLVDPLAEIISEMENYQNMIEQTLDFSLVERAEFLIRSSYDESLTELHEEKEKIQA
KMHRVWENVADELGLEKGKGVKLESTEQLGYFLRVTLKDEKILRKHKEFKTLGVIKGGCR
FTNDRLTSLNDKYQNVNEEYKERQKDIVKEVVDVAAGYAESLKSLNLLIAKVDVLTSFAV
AAVSARIPYVKPKIHKQGTGYLNLKQMRHPCIEAQSNISFIPNDVSFEKDGARFYVITGP
NMCGKSTYIRSVGTAVLMAHIGCLVPCSVAEISIVDAILVRVGAEDCQLKGLSTFMLEMV
ETSTIIKTATADSLVIIDELGRGTSTYDGCGLAWAIAEHLARDIRSFSMFATHFHEINEL
AENYDCVANLYVSALVTDTTMTPLYTVREGECDKSYGVHCARIVNFPDDVIQGAIEYQRN
LEHQNGMKYLSDFEPSVKRKYVAEGDAMIRTAMKQLKSMDINSLTDEELMKKIEEMKDDL
LKKEHLFVKGLMDV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaacctttcaaagctttaaatttagatattactcaacagcaagagtttgtg
agatattttagaaatcttccagaaaaagctccatctactatccgcttcttcaaccgaacc
gaattctactctctccatggagacgacaccacagtggccgtggaatgtacctgcgccaga
gtcaaatacatgggcatggagccccagctcagctacgtcacactcagcaagggtcagttc
gagatatttctgagagaactgttgttagtaagacagtacagggttgaagtgtatgtcaaa
aaggccaccaaaagcaatcagtggtctttggagtataagggctctcctggtaatctgagt
cagttcgaggatctgttgtttgaaaacacgtccatcaagttcaataatgctgttatgtgt
ttgaaggttttcgccaataggttattggcggtagcttgtatcaacatttccgaatgtaag
tttgaagtttgcgaattaaccgataacgatacgttctccgaattggaaagtttaactgct
caaatcggacccaaggaatgtattttgcctacaggatcaacgcccgatctcgtcacgata
aagaaacttttggaacgaactggaattatggtatcccaagtcaagaatacagatttcacc
gacgaagatctcggacaagacctaaaccgtcttttgtactttgccgaaggccaacagaga
aatgctttctctttccacgaaacaaaccttaaaaatgccatgtgttgtctacaggcgggt
atcaaatttttcgagatcggtcaagatgaaaagaatttcaatcagttcaagattagtaca
ctggataccaaaaggtttgttagaatcgacaacgcagctctatacgctctcaacgtgtta
cccaaacccacacctggtaccaccaagatcagcaaatcaacaaaaacttcgtgcctaaag
ggacttttggactattgtatcaccgcacaagggagcaggttgctggaacagtggataaag
caacctctaaaggattatctggctattaatgaacgactagaaattgtagagacgattgcg
aagaattcagatgtcagaacgcagttgacaaaagattggctacctcgagtaactgatttg
atacctttgtccagaaaagttgcatcaaaaaaggcgaggcttcaagattgctacaaggta
tatcaagttgtgagcaccgtgccatcaattataaaagtacttaaagaaactaataacaag
tttgtaaaggacatgctggttgatccgttggcagaaatcatttcagaaatggaaaattat
caaaacatgatagaacagacactagattttagtttggttgaaagagccgagtttcttata
agaagttcctatgacgaaagtttaacagaattacacgaggaaaaagaaaaaatccaggcc
aagatgcatagagtttgggaaaacgttgccgatgaattgggcttggagaaaggcaaaggt
gtcaaattagagtccaccgaacagctcggctacttcttgcgagttaccctcaaagatgag
aaaattctgagaaaacacaaagagttcaaaacgctgggagtgattaaaggtggttgcagg
ttcaccaacgacagattaactagtttaaatgacaagtatcaaaatgtcaatgaagagtac
aaagaacgacagaaagatatcgttaaagaagttgttgatgttgcagctggttatgcggaa
agcttaaagtcattgaacttattaatcgccaaagtggacgtgttgacatcctttgctgta
gccgcagtttcggcaaggattccttacgtcaaaccaaaaatccataagcaaggaacggga
tatttaaatttgaaacaaatgaggcatccttgtatcgaagcacaaagcaatatatccttc
attcctaacgatgtgtcattcgagaaagacggtgccaggttctacgtaataacaggtccc
aatatgtgtggtaagagtacgtatatacgaagcgttggtactgcagtattaatggcacat
attggttgcctggttccttgttctgtagccgaaatatccattgtcgatgctattttggtg
agagttggtgcagaagattgccagttaaagggtctttccacatttatgctggaaatggtg
gaaacatctactattataaagactgcaacagctgattcactagtcattatcgacgaattg
gggcgaggcacttcaacttatgatggatgcggattagcttgggcgattgctgaacatttg
gcgagagatattcgcagtttttcgatgtttgctacacattttcacgagattaacgaacta
gcagaaaactacgattgtgtggccaacttatatgtctcagctttagttactgatacgaca
atgactcctctgtatacggtacgtgaaggcgaatgcgacaaaagctacggagtacattgc
gcacggattgtgaactttccagatgatgttatacagggagctattgagtatcagagaaac
ttggaacatcaaaacggcatgaaatatttaagcgatttcgagccaagcgtgaaaaggaaa
tacgtcgcagaaggagacgcaatgatcagaactgctatgaagcaactgaaatcaatggac
attaatagcctgaccgatgaagaactgatgaaaaaaattgaagaaatgaaagacgaccta
cttaaaaaggaacacctgttcgttaagggactcatggatgtttag
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