Diabrotica virgifera virgifera (western corn rootworm): 114333700
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Entry
114333700 CDS
T09922
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03022
Basal transcription factors
dvv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114333700
09124 Replication and repair
03420 Nucleotide excision repair
114333700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114333700
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114333700
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114333700
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114333700
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114333700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
114333700
NCBI-ProteinID:
XP_028139449
UniProt:
A0A6P7FSQ3
LinkDB
All DBs
Position
5:752943..769800
Genome browser
AA seq
789 aa
AA seq
DB search
MGPPKRSNPYKSDSKSQKKRNKKEDNEEWNYEEDDTNDTDVVEADVPGAAARDAEKNDQA
VQEDEFGAKDYRSEMILKPDNMSRPLWIAPNGHIFLESFSPVYKHAHDFLIAISEPVCRP
ECIHEYKLTAYSLYAAVSVGLQTNDIIEYLKRLSKTSVPEGIIEFIKLCTLSYGKVKLVL
KHNKYFVESPFPEILQKLLKDPVIQECRLRRNLENESEEFIKQTQDKKKVPTFGAKPGTS
GEPSGNADGAVVPDDITSFYEKIDEGEDEEDASLETVSFEVNQEKIEIIQKRCIELEYPL
LAEYDFRNDTINPDINVDLRPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGV
TACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCAILVTTYS
MITHTQRRSWEAEQTMKWLQEQEWGIMLLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLL
REDDKIADLNFLIGPKLYEANWLELQKRGYIARVQCAEVWCPMTPEFYREYLVCKTSKRL
LLYVMNPNKFRATQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTSQGERIQ
ILQNFKFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGAV
AEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYSYKVITKLAGIEDEPDMMYKTRDEQG
QLLQQVLAASDIDCEDERIPGEGGSKAGGTVRKAGNMGSMSGADDAVYYEYKKGGGMLNK
HPLFKKFRY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaccaaagcgctcaaatccatataaatccgacagtaaatcacagaaaaaacgt
aataaaaaggaagacaatgaagaatggaactacgaagaagatgacaccaatgatacagac
gtagttgaagctgatgtgccgggagctgcagctagagatgccgaaaagaatgaccaagcg
gtacaagaagatgaatttggagccaaagattaccgctctgagatgatactgaaacctgat
aacatgtccaggcctttgtggatagcaccgaatggtcacatctttttagaatctttctct
cctgtgtataaacacgcacacgactttctaatcgccatttctgaacctgtctgtcgtcca
gaatgtatacacgaatataaactaacagcatattcgttatacgctgctgtaagtgtgggt
ctacaaaccaacgatattatcgaatatctgaaaagactgagcaaaactagtgttcctgag
ggtattatagagttcatcaagttgtgtacgttatcttatggtaaagtgaagttggtttta
aagcataacaagtacttcgttgagagcccttttcctgaaattttacaaaagttgttgaaa
gatccagttattcaagaatgcaggttaagaagaaatttggaaaatgaaagtgaagaattt
atcaaacagactcaagacaagaaaaaagtgcctacctttggggctaaaccaggcacctcg
ggagaacctagtggtaatgcagatggagctgtagtgcctgatgatataactagtttttat
gagaaaatagatgaaggggaagatgaggaagatgcttccttagagactgtgtctttcgag
gtcaatcaagaaaaaattgaaatcattcaaaagaggtgtatagaactggaatatccactg
ctagcagagtatgatttcaggaatgacaccataaacccagacataaatgttgatctgcgt
ccttcagctgtcttgagaccttatcaggaaaagtctctaagaaaaatgtttggaaatgga
agagcaagatctggtgtgatagttttaccttgtggagctggaaaatccttggtaggagtg
actgcctgttgtacagtcagaaaaagagccttggtgctgtgtaattctggggtatctgtc
gaacaatggaagcaacaatttaagatgtggtccacagctgatgatagtatgatatgccga
tttacttctgaagccaaagacaaaccaatgggctgtgctattctcgtcacaacatattct
atgatcacccacacgcagcgtagatcatgggaagccgagcaaacaatgaaatggttgcag
gaacaagagtggggaataatgctcttggatgaagtccacacaatacctgccaagatgttc
agaagagtgttgacgatagtgcaaagtcattgcaaattgggactaacagccactttgctg
agagaagatgataagattgctgatctgaatttcttgatcgggccaaaattgtatgaggcg
aattggttggagttgcaaaagagaggttatattgctagagtccaatgcgcagaagtctgg
tgtcccatgacaccggaattttatcgggaatatcttgtgtgcaaaacaagtaaacgactg
ttgttgtacgttatgaatccaaataaattcagagccactcagtatttaatcagatatcac
gaaagaagaggcgacaaaactattgtattttccgacaatgtgttcgccttgaagcattat
gcaataaaaatgaacaaaccgtacatttatggtcctacatcgcaaggagaaagaatccag
attttgcagaacttcaagtttaatcccaaggtgaacacgattttcgtgagtaaagtagca
gatacttccttcgatttaccagaagccaacgtcttaatccaaatatcttcccacggtggt
tcccgaagacaagaagcccagagattaggtagaattttgagagcgaaaaagggagccgta
gcagaagagtataacgcctttttctatacgttggtgtcacaagataccatggaaatgaac
tattccagaaagaggcaaaggtttttggtgaatcaggggtacagttacaaggttattacg
aagttggccggtatagaggatgagccggatatgatgtataaaactagagatgagcaaggg
cagctactgcaacaggtattagcagcaagtgatattgactgtgaagatgagcgcattcca
ggcgaaggtggttctaaggcgggtggtaccgtaagaaaggctggaaatatgggttccatg
tcaggagcagacgatgctgtgtactacgagtacaaaaaaggtggtggtatgctcaataag
catccactcttcaagaaatttagatattag
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