Diabrotica virgifera virgifera (western corn rootworm): 114333762
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Entry
114333762 CDS
T09922
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114333762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114333762
Spliceosome [BR:
dvv03041
]
Complex A
U1 snRNP components
U1 related factors
114333762
Complex B
114333762
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
114333762
NCBI-ProteinID:
XP_028139559
UniProt:
A0A6P7FT15
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Position
5:complement(643778..682320)
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AA seq
766 aa
AA seq
DB search
MDPGLPPQTFVAPPGIGTPPLLPQVPIPAPIAGLSPFSPMIPSFTVPPPGFNNFGPPGVP
GIVPSNIGPITPGSEWTEHKAPDGRTYYYNSVTKQSSWQKPDQLKTPAELLLSQCPWKEY
TADNGKIYYHNVTTKESRWSIPPDLEEIKKKIAAEDIKPPSGSVTPREVNSPAPVSQPVL
SAGSTGPNSPTAMPSPGGKSALEAAMAATLAAISLPNPPAKSDEDTSTPQAEASKESRTA
TPEPIVFTNKKEATEAFKELLKEKNVPSNASWEQCVKIISSDPRYETFKKLNEKKQVFNA
YKTQKQKDEKDEQRLKSKKYKEQLEEFLLATDLISSSTKYYRCDELFSTKEVWQNVNDQD
RRDIYDDVMFSLAKREKEDAKNLKKRNMKKLSEVLECMTKINYDTTWSEAQVSLLENSTF
KNDVNLLAMDKEDALIVFEEHIRVLEKEYAEEREREKRRLKRQCRKNRDQFLALLDHLHE
EGKLTSMSLWVELYPIISADIRFSAMLGQNGSTPLDLFKFYVEDLKARFHDEKKVIKDIL
REKAFEVQIDTTFDQFATVICEDKRSAALDAGNVKLTYNSFLEKAEVKEKERLKEESKRM
KKLESNLKELLKEMNIDFELPWDEVKAKLEKEDEFLAFESDSERQRVYREFQHEMEESCS
HHHSRSKKSKKKKKKVYKSSSSDSGSDKHKKSKHKSKSPTPYSEDSADEYRKKKSKKKHK
RKMSPNTPPEKYVGRGESEGRRGEMSETELEKQRALLLAKLNNESD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggtcttccaccgcagacattcgtggccccgccgggtatagggactcctccg
ttgctgccacaagttccgattcctgcgcctatagcagggctctcgccgttttctccgatg
attccttcgtttactgtgcctcctcctgggtttaacaacttcgggcctcctggagttcct
ggaattgtgccttcgaatatagggccaattacaccagggagcgagtggactgaacataag
gctccggatgggaggacctactattataactctgttacgaaacagagttcgtggcagaaa
ccagatcaattaaaaactcctgctgagttgctgctgtcccaatgtccatggaaagaatat
acagcagataatggaaaaatctattaccataatgtcactacaaaggagtcacgctggagt
atacctccagacttggaagaaattaagaagaaaattgcagctgaagatataaaacctcct
tctggatcggtcacaccaagagaagttaacagcccagcgcctgtttcacaacctgtttta
tcagcaggttctacaggacccaattcaccaactgccatgccaagtccaggtggaaagagt
gccctagaagctgccatggctgctacgttggcagctatctcattgcccaatccacctgct
aaatcagatgaagataccagtactcctcaagctgaagcttcgaaagagtctcgtacagca
acacctgagccaatagtatttaccaacaagaaagaagcaactgaggcgtttaaggaactt
ctgaaagagaaaaatgttccttcaaacgccagctgggaacagtgtgtcaagattatatca
tcagatcctagatacgagaccttcaagaaattaaatgagaaaaaacaggtttttaatgca
tataaaactcaaaaacaaaaagacgaaaaggatgaacaaaggctaaagtctaagaaatat
aaagaacaattggaagaattccttcttgctactgaccttatatcttcaagtacgaaatat
tacagatgcgatgaactattcagcacaaaggaggtgtggcaaaacgtcaacgaccaagac
agaagagacatctacgatgacgtcatgttttctttggccaagcgtgagaaagaagatgcc
aagaatctgaaaaagcgcaacatgaagaaactgtccgaagttttagagtgtatgactaaa
attaactatgataccacttggagtgaggcccaggtgtctttgttagagaacagcaccttc
aaaaatgacgtaaatctgctcgccatggacaaagaagatgcccttatagttttcgaagaa
catatcagggtgttagagaaagaatatgctgaagagcgagaacgagagaagaggagattg
aagagacaatgtaggaaaaacagggatcagtttctagcacttttggatcatttgcatgaa
gaagggaaattgacttcgatgtcgctttgggtagagttgtatccgattatttcggcggat
attcgattttctgcgatgttaggtcagaacggttcaactcctttagacctctttaaattt
tatgtcgaagatctgaaggcgcggttccacgacgagaagaaagtaatcaaagacattctc
agagaaaaagcatttgaagtacaaattgatactactttcgatcaatttgctactgtcatc
tgcgaagacaagaggtctgctgcgttggatgctggaaatgtgaaattgacatacaattcc
ttcctagaaaaggctgaagtgaaagaaaaggagagactgaaggaagagagtaaacggatg
aagaagttggaatccaatttgaaggagctcttgaaagagatgaatattgatttcgaattg
ccttgggatgaggttaaagcaaaattggaaaaggaggacgaatttttagcgtttgaatct
gacagtgaaagacaaagagtctatagggaatttcaacatgaaatggaggaatcgtgcagc
catcaccattcccggtccaagaagtctaagaaaaagaagaagaaggtgtacaaatcctct
tcgagcgattccggtagcgataaacataagaagtccaaacacaaatcgaaaagccctacg
ccttattctgaagacagcgcagacgaatatcggaagaagaaatcgaagaagaaacataag
aggaaaatgtctcctaacaccccgccagaaaagtacgttgggaggggcgagtccgaagga
aggaggggtgagatgagcgagacggaactagagaaacagagggcgctgctgttggccaaa
ctaaacaacgagagcgattga
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