Diabrotica virgifera virgifera (western corn rootworm): 114334982
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Entry
114334982 CDS
T09922
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114334982
09123 Folding, sorting and degradation
03018 RNA degradation
114334982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114334982
03041 Spliceosome [BR:
dvv03041
]
114334982
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114334982
mRNA degradation factors
5'-3' decay
Lsm complex
114334982
Spliceosome [BR:
dvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114334982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114334982
NCBI-ProteinID:
XP_050506574
LinkDB
All DBs
Position
5
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AA seq
89 aa
AA seq
DB search
MSTMPVTSSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLDDVTEYENTP
EGRRITKLDEILLNGNNITMLVPGGDMPE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagtactatgccagtgacttcttcaacacttctaccattggaattggtagataaatgt
attggttcaagaattcatataatcatgaaaaatgataaggaaattgttggcacattatta
gggtttgatgattttgtaaatatgttgctggatgatgttacagagtatgaaaatacacca
gaagggaggcgtataacaaaactggatgaaattttgctcaatggaaataacataacaatg
cttgtacctggaggagatatgccagaataa
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