Diabrotica virgifera virgifera (western corn rootworm): 114337179
Help
Entry
114337179 CDS
T09922
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X2
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
dvv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114337179
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114337179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114337179
04121 Ubiquitin system [BR:
dvv04121
]
114337179
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114337179
Enzymes [BR:
dvv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114337179
Spliceosome [BR:
dvv03041
]
Complex B
Other components
Prp19 complex
114337179
Complex C
Prp19-CDC5 complex
114337179
Ubiquitin system [BR:
dvv04121
]
Ubiquitin ligases (E3)
U-box type E3
114337179
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
114337179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
U-box
Beta-prop_DCAF4
eIF2A
Ge1_WD40
WD40_like
Beta-prop_Nup120_160
PAS_11
Cytochrom_D1
CT47
Beta-prop_RIG_1st
zf-Nse
Motif
Other DBs
NCBI-GeneID:
114337179
NCBI-ProteinID:
XP_028143382
UniProt:
A0A6P7G932
LinkDB
All DBs
Position
2:complement(129782711..129846330)
Genome browser
AA seq
501 aa
AA seq
DB search
MALCCAISNEVPEYPVVSPSSGAIFEKRIIEKYIQENGVDPISGKELTIDDLIEIKTPPV
VKPKPPSATSIPATLKLLQDEWDAVMLYSFTQRQQLQTARQELSHALYQHDAACRVIARL
NKEVTAAREALATLKPQAGITTVPQPAVAAEAAGVANQPTEQAGMSEEIIEKLQEKATVL
TLERKQKGKTVPEDLTTPEQLRNFRTLSSLIGLHSASIPGILALDVHLSDTSKVLTGGND
KNATVFNKDTEQVVAILKGHTKKVTKVIYHPDEDLVLTASPDATIRVWNVPTSQTTLLLR
PHEGPITGLSLHPTGDYVLSTSEDQYWAFSDIRTGTLLAKLSDNTNTPLTTAQLHPDGLI
FGVGTADSQVKIWDLKEQTTAANFTGHSGAISSISFSENGYYLATAADDACVKLWDLRKL
RNFKTLQLDEGYQIKDLCFDQSGAYLAVAGTDVRVYLCKQWQELKVFNDHTATATGVRFG
KHARFIASTSMDRTLKLYGLD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtgttgtgccatttcaaatgaagttccggaataccctgtggtatccccatcg
tcgggtgcgatatttgaaaaaaggataattgaaaaatacatacaggaaaatggcgtggat
cctattagtggcaaagaactgacaatagatgatttaattgaaataaaaactcctcctgtt
gttaaaccgaaaccacctagtgcaactagcattcccgcgaccttaaagcttttacaggat
gaatgggatgctgttatgttatatagttttacacagagacaacagcttcaaacagctaga
caagaattaagtcatgccctgtaccaacatgatgcagcttgcagagtaattgccaggctt
aataaagaagtcacagctgcaagagaagcccttgctacacttaaaccccaagctggaatt
acaacagttccacagccggctgttgctgctgaagctgcaggtgtagcaaaccaaccaact
gaacaagctggtatgagtgaagaaatcatagaaaaattacaagaaaaggctacagtgttg
acattagaacgtaaacagaaggggaaaacggtacctgaagatttgacaacccctgagcag
ttacgaaacttcagaacattatcctcacttatcggattacattcagcaagtatccctggt
atattagcattagatgttcatttatcagacacaagtaaagtgttgacaggtggtaatgat
aagaatgctactgtatttaataaagatactgaacaagtagttgccatattaaaaggacat
accaaaaaagtcacaaaggttatttaccatccagatgaagatttagttttaactgcttct
ccagatgccaccattcgtgtctggaatgtaccaacatcacaaacaactttacttttgcga
cctcatgaaggtcctattactggtttgtcattacatcctacaggagactatgtactgtcg
acatcagaagatcaatattgggcgttttcagatataagaactggaactttgttagctaaa
ctttcagataataccaatacacctttaacaacagcacagttacatcctgatggtttaatt
tttggagttggtacagcagattctcaagtcaaaatttgggacttaaaagaacagactaca
gctgcaaatttcacaggacattccggagcaatttcatctatatcattctctgaaaatggt
tactatttagcgacagctgctgatgatgcttgtgtaaaactgtgggatttgcgaaagtta
cgaaatttcaaaacattacaattagatgaaggttaccagatcaaagatctctgctttgac
cagagtggtgcatatctagcggtagctggaacagatgttagagtgtacctttgcaaacaa
tggcaagaactgaaagtatttaacgatcacactgctactgctaccggagttcgattcggt
aaacatgccagatttattgcctcgacttccatggacagaacgttaaaattgtatggttta
gattaa
DBGET
integrated database retrieval system
