Diabrotica virgifera virgifera (western corn rootworm): 114338387
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Entry
114338387 CDS
T09922
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114338387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114338387
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114338387
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
DUF5615
AAA_14
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
114338387
NCBI-ProteinID:
XP_028144780
UniProt:
A0A6P7GLY5
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Position
3:complement(36458789..36507270)
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AA seq
1117 aa
AA seq
DB search
MAKRQSTLFNYFSSPKVAKKEDTKKEPAKSDDEEEIITTKKRHRQVIDDSSDSDNEGNKK
KTSKRDVRSSSSSEAENSSPNKSKKGSVKNNKIKDDPDEESVSPKKSVKGLFTKPVSNGS
QNKKNKDDSDEETVSLKKPVKGLLNKPVSNESQGQESSTNNEATDMHTSWLHNTLDFLKP
ENIRDINKRKPDHPEYDCRTLYVPEKYLTTLTPVMKQWWELKSRHMDTVLFFKVGKFYEL
YHMDAVVGVIELGFSYMKGEFAHSGFPESAYGKMLPILLEQGYKVARVEQTETPEMMAER
CKGKSTTKYDKVVKRELCQITSDAICVYTAQMEDWQNEKPRFMFAICTKEGAYGNARIGV
CLVETSMGFFHLSEFDDDKHFSRLLALFTEFPPVLILTEKGTVSKELSELLQTHFKDIKQ
DSLVTKSQFYTAYDTLEKLSSACYFRDSEGNFAWPEIFKTLADDCMPKPEYELAIRSLGA
CMWYLKDCKVDIQVLSMKKFQWYDPLDFTLKDKRKQDHLVLDSATIHNLELLGFSNTLKS
VLDHCKTSFGKRLLTRWICRPLCDPVKIKERQNAIKHLVNDTSLLQDAQNILKETPDLER
LLMKIHTYGSKSLTTQHPDGKAILYDNKTYSRNKIRDFLKTLKGFEKACEITHLFKGCEN
RLLRKLTQVKPTGGFEDLSETLRYFENAFDQQEAEKEGKIIPRKGVVEEFDDVEDTIDSI
NKKLNDYLKEQSKFFGSSLKYVGTDKKRFQLEVPENKSHKATEKYRLEGSKKGSSKKFTT
DTTRALLAEMIEAEGIRAKVILDISRKIFEKFSSKQDQFDRVIQCLTVLDVICSLAEYAK
NYSYEICLPDVLPFSDEPKLIIQDGRHPCAQNLDSFVPNDTKMGVEGFPSLIVITGPNMG
GKSTLMRQIAVICVMAQMGSYVPASKCELTLLDRIFTRLGAQDDLTKAQSTFYVELSEAS
CILQYATKHSLVIIDELGRGTSTHDGNAIATSYVKKLTEFKCRTTFSTHYHSLVDHFTDS
PEVQLGHMACMIENEDNEEEISVEHVTFLYKMAKGRCPKSYGFNAARLAGLDNKLISEGM
AVARRFEERNKLWNAFQTSIHSKQISDIRRAITSLSL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgacaaagtacattgtttaattatttttcaagcccaaaggttgcaaagaaa
gaagatacaaagaaagaacctgctaaaagtgatgatgaggaagaaataattacaaccaag
aaacgtcatagacaagtaatcgatgactcttcagatagcgataatgaaggaaacaaaaag
aaaacttctaaaagagatgtcagatcaagtagtagctcggaagcagaaaattcatctcca
aataaatcaaaaaaaggcagcgtcaaaaataacaagattaaggacgaccctgatgaggag
agtgtaagtcccaaaaagtcggtaaaaggcctctttaccaaaccagtttcaaatggatct
caaaataaaaagaataaggatgactccgatgaggaaactgtaagcctaaaaaagccggta
aaaggccttctaaacaaaccagtctcaaatgaatctcaaggtcaagagtcatcaacgaat
aatgaagctactgatatgcacaccagttggttacataacactttagacttcttgaagcct
gaaaatattagagacattaataaaagaaaaccagatcatccagagtatgattgtcgaact
ttgtatgtccccgagaagtatttaactaccttaacaccggttatgaaacagtggtgggag
ttaaagagtcgacacatggatacagttttgtttttcaaagttggaaaattttatgaactt
taccacatggatgcggttgttggtgttattgaacttggattttcatatatgaagggagaa
tttgcacattcaggatttccagagagtgcatatggaaaaatgttgcctatattgctggaa
caaggatataaagtagcaagagttgaacaaactgaaactccagaaatgatggccgaaaga
tgcaagggtaaatcaactactaaatatgacaaagttgtcaagagagaactttgtcaaatt
acatcagatgccatttgtgtatacactgctcagatggaagattggcagaatgagaaacct
cgttttatgtttgctatatgtacgaaagaaggtgcttatggaaatgccaggattggagtt
tgtcttgtcgagacctcaatgggatttttccatctgtccgaatttgatgacgataaacat
ttttctagactgcttgcacttttcacagaatttccacctgtattgattctgacagaaaaa
ggtactgtaagcaaggaactttctgaactgttacaaacccatttcaaggacatcaaacaa
gattcgttagtaacgaagtctcagttttatactgcttatgatacgttagaaaaactttct
tcagcatgttacttcagagacagtgaaggaaattttgcctggcctgaaatttttaagacc
ctagctgatgattgtatgccgaaaccagaatatgagttagcgataaggtctttaggtgcc
tgtatgtggtacctcaaggattgtaaagttgacattcaagttttatccatgaaaaaattc
cagtggtatgacccgttggattttaccctaaaagataagcgtaaacaagatcacttagta
cttgactcagccactatacataatttggagttacttggtttttcaaatacgttgaaaagc
gtcttggaccattgtaaaacatcatttggaaaaaggttattgacaaggtggatttgcaga
ccattatgtgacccagtaaaaatcaaagagaggcaaaatgcaatcaagcatttagttaat
gataccagtttgttacaggacgcccaaaatattcttaaagagacacctgatctagaacgt
ctgttaatgaaaatacacacgtatggtagcaaatcacttacaactcagcacccagatgga
aaagcaatactatacgataacaagacttattcaagaaataaaattagagatttcttgaaa
actttaaagggatttgaaaaagcttgtgaaattactcatttgtttaaaggctgtgaaaac
cgacttctgagaaaattaacacaagtgaaaccaacaggaggatttgaagatttgtctgaa
actttaaggtattttgagaatgcttttgaccaacaagaagctgaaaaagaaggaaaaatc
attcccagaaaaggtgtagtagaggaattcgatgatgtcgaggatactattgattccatt
aataagaagctaaacgattatctgaaggaacaatccaaattctttggttcttctctaaaa
tatgtaggaacggataaaaaacgatttcagttagaggttcctgagaacaagagtcacaaa
gccacagaaaaatatcgactagaaggtagcaaaaagggatcttcaaagaaatttacaacc
gatacgacacgggcgttgttagccgaaatgatagaagcagaaggaattagggccaaagtc
atcctggatataagtagaaaaattttcgagaaatttagtagcaaacaagaccagttcgat
agagtgatccaatgtttgacagttctcgatgtaatttgctctttagctgaatacgcaaaa
aactattcctacgaaatatgcctaccggatgtactaccatttagtgacgagcctaaacta
ataattcaagatggacgtcatccatgtgctcaaaacctggacagttttgttccaaacgat
actaagatgggtgtcgaaggatttccttccttgattgtcataactggaccaaatatgggt
ggtaaatcaacgcttatgcgacagattgctgtaatctgcgttatggcccagatgggaagc
tatgttcctgcatcgaagtgtgagcttactcttctagatcgtatcttcacccgtcttggt
gctcaagatgatcttactaaagctcagtctacgttttatgtggaactttcagaagcatct
tgtatacttcagtatgctacgaaacattcactcgttatcatcgatgaattgggtagagga
acctcaacgcacgatggaaatgctatagcaactagttatgttaagaagttaacagagttt
aaatgcagaacaacgttttctactcactatcactcactggtcgaccatttcacggatagt
cctgaagtacaattaggtcatatggcctgcatgatcgagaatgaagataacgaagaagaa
atttccgttgaacacgttacgtttttgtataaaatggcgaaaggcaggtgtcctaaatcc
tatggatttaacgcagctagacttgctggtctcgataacaaactcatatcggaaggaatg
gcggtagctaggcgattcgaagaaagaaataaactgtggaatgcgtttcaaacatcgata
cattcaaaacaaatttccgatattcggcgtgccataacgtctctttctctttaa
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