Diabrotica virgifera virgifera (western corn rootworm): 114338423
Help
Entry
114338423 CDS
T09922
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03440
Homologous recombination
dvv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114338423
03450 Non-homologous end-joining
114338423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvv03032
]
114338423
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114338423
DNA replication proteins [BR:
dvv03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114338423
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114338423
BRCA1-C complex
114338423
NHEJ (non-homologous end-joining)
MRX complex
114338423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_29
DUF5448
NACHT
AAA_16
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
114338423
NCBI-ProteinID:
XP_028144824
UniProt:
A0A6P7G6Y9
LinkDB
All DBs
Position
2:complement(170470654..170558180)
Genome browser
AA seq
1301 aa
AA seq
DB search
MALLQSLQISGIRNFSPDNHQTVYFDTPVVLFQGPNGSGKTTILETIRFALTGELPGGTT
GGKGFVNEPKMSNKNSTKGNIRIKFSDAEGNILTVNKVVQVQLNTKGDLTFKKFPPTIRK
RPKEDPSDVQDISGRCIDVDGFCCSSINVSKSIFNNVLFCHQENSLWPLDEPKKLKEKFD
EIFDAVKYNKCIDQIRKQIKEQHVHVKMGEKVAEVRKDKKVEVDKKRGKLEDKKDKLKQI
KNSIEEKINEMKPLNERMKKILELEESLGALQRKLSGKEEEKKGLVNQQKLLLKDISYVF
EGTDEELQSKITSFKDEQSSEESAIKKLEMSIQSLNKEIDSVNRSIQHKQVQMGQMKEEQ
NQYNKKKEETNKLIDNLRTELNLVEDYEDQELLLGELNNALKMLGSKFNELKKEKDAEEN
ELQSQIDTLREKNAKTEQMIASKNGSIKENTAKLKEIQCKLEELDTSDSQLRNVTGKIDS
LQSDLSKIKNSFDENKKLREIQELKDQIESKEQYLDKLERENRILQRNYATEQNIETQRN
MILEKQGQINRIKTKHSNHFAKLFSDGLPEKDLKRSVLNIQNTQEAEFRKLTSLINSSER
QITTLETTLKHSRDQLRIRQQDLSTKKQKVAELCKGRDFNTVLEDTYKKKDKLQKDKGQY
AAAEIMYKAFINKLEEKHSCPVCKTDFKDNRTAIPEIIRELKGKIEQIPSGLLKVEGELK
KEEAFYNKLQQLKTINDVIQNLTNEEIPELEKKIETLDEEFTEKSMSLADLKQQQEQPQQ
TIEICKAIITDATLFDQYNTDIRNANSTIQDLEESIERVPSNRSRLETESEIDAVKGQLS
NAKNGYETNKNMLESHRERYQELNKKIQNEVQRQLDIQKLVQEKPLLETQNTEINEKLVV
LKIDVDELKLNIASQKQELKEAIEAKTKATITNNQIKETARNKLNLHQNSLSDIHKLLKG
IREYERNENQDKLKKAVEELAELKVSLETHEKTKTINLESVSKKKESLAKRDSEFRALKD
NVTLRKIQNKQTIVETEVEELRQKIEGANYQQVYEEKQRKTDEINKKQREKNNLLGQQEE
VQTQIDELSDELSRADNRNAHKLYKKAHYELSLNKLVIEDLTRYVNILEKSVLKFHEERM
VQINTSIRKLWRTIYRGNDIDYIEMKTDDTLAAGKRRSYNYKVVQVKNGIELDMRGRCSA
GQKVLACLVIRMALAETFSSHCGILALDEPTTNLDKANICSLSDALSELIASRENQTNFQ
LLIITHDEEFLRSITQVQSLDNYWQVKRNDRGSSTVEKVML
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttacaaagtttacaaattagtggcattagaaacttcagcccagataaccac
caaacagtgtatttcgacactcctgtggttcttttccaaggacctaatggttctggcaaa
actacaattttggaaactatcaggtttgcactaacgggagaattgccaggtggtaccact
ggtggaaagggttttgttaatgaaccaaaaatgtcaaataaaaattcaactaaaggaaat
attaggatcaaattttcagatgcagaagggaacatactaacagttaataaagttgtgcag
gtccaattgaatactaaaggtgacctcacttttaaaaagtttcctcctaccattcgcaag
agaccaaaagaagatccatcagatgtccaagatataagtgggcgttgtattgatgttgac
ggtttctgttgctcttccatcaatgtctccaagtcaatatttaataatgtcctcttctgt
caccaagaaaactcattatggcctttggatgaacctaaaaagcttaaagaaaagtttgat
gaaatttttgatgctgtcaaatacaataaatgtattgatcaaattcgcaagcaaataaaa
gagcaacatgtacatgtaaaaatgggtgaaaaggtagcagaagtaaggaaggacaagaaa
gtagaggtggacaagaaacgaggcaaactcgaggataagaaggataaattaaagcaaatt
aaaaatagcatagaagagaagattaacgaaatgaaacccttaaatgaaagaatgaaaaaa
attttggaactggaggaatcgctgggtgcacttcaaagaaaactttctggaaaggaagaa
gaaaagaaaggtctggtgaaccagcagaagttgttgctcaaagacatatcgtatgtattt
gaaggaacggatgaagaacttcaatccaaaataacgtcgtttaaagatgaacaatcgtct
gaggaatctgccatcaaaaagttggaaatgagcattcaaagtctcaataaggaaatagat
tccgtaaatcgcagcatacaacataaacaagttcaaatgggtcagatgaaagaggagcaa
aaccagtacaacaaaaagaaagaagaaactaataagcttatagacaacttacgcacggaa
ctaaacctagtggaagattacgaagaccaagaattgttattgggagagctcaacaatgct
ttaaaaatgttgggaagtaaattcaatgagctaaagaaggaaaaagacgccgaagaaaac
gagctacaatcgcaaatagatactctaagagagaaaaacgccaaaaccgaacaaatgatc
gcttcgaaaaatggttctatcaaagaaaatacggccaaattgaaggaaattcagtgtaaa
ctggaagaattggatacttccgattcacagctgaggaatgtaactgggaaaattgactcc
cttcaatcagatctctctaaaataaaaaattctttcgacgagaacaaaaagctacgagaa
atccaggagttaaaagaccaaatcgagagcaaggagcaatatcttgacaaattagaacga
gaaaatcgaattctgcaaaggaactacgcgactgagcaaaatatagaaactcaacgtaat
atgatactggaaaaacaaggtcagatcaataggatcaaaaccaaacattctaatcatttc
gcgaaactgttcagtgatggcttgccagagaaagacttaaaaagatctgtattaaacatt
caaaatacgcaagaggccgaattcaggaaactcaccagtttaatcaatagctcggagaga
caaataacaactttggaaactacgttgaagcattccagagatcaactcagaatacgccag
caagatttatcaacaaagaaacaaaaagtggcggaattgtgcaaaggacgagacttcaat
accgtcctagaggatacgtacaaaaagaaggacaagcttcagaaagataaaggacaatac
gcggccgcagaaataatgtacaaagcttttatcaataaattagaagaaaagcacagttgc
ccagtttgcaagacggacttcaaagacaatcgaaccgccattccagaaataattcgcgaa
ctcaaaggaaagatcgagcagattccgtctggattgttgaaagtcgaaggtgagttgaag
aaagaagaagctttttataataagctccaacagttgaaaaccatcaatgatgtcatacaa
aatctgaccaacgaagagattcctgagttagagaagaaaattgagacactcgacgaggaa
tttacagaaaagtctatgagtttagcagatcttaagcaacaacaggaacaaccacaacag
acaattgaaatttgcaaagctattataacggacgctacgttattcgatcagtacaatact
gacatccgcaatgccaattctactatacaagatttggaagaaagtattgagcgggtgcca
tcgaaccgatccaggctggaaaccgaaagcgagatcgacgcggtcaaaggccaacttagc
aatgcgaaaaacggatatgaaaccaacaaaaatatgttagaatcgcatagagagagatat
caagaactgaacaagaagattcaaaatgaagtccaaagacaacttgacattcaaaagcta
gtccaggagaaacctcttctagaaacacaaaatacagagattaatgaaaaattggtcgtt
ttaaaaatagacgtagatgagctaaaattaaatatagcttctcagaagcaagagctaaag
gaagctatagaagctaaaacaaaggccaccataacaaataatcaaataaaagaaacagct
aggaacaagctcaatttacatcagaatagtttaagtgacatccacaaactgctcaagggc
attcgcgaatacgaaagaaatgagaatcaagacaaattgaagaaggctgtagaagaatta
gctgagctgaaagtttctttggaaacccacgaaaagactaagactataaatttggaatcc
gtttctaaaaagaaagaatcactcgcaaaaagagatagtgagtttagagcactaaaagac
aacgtgacactgaggaaaatacaaaataaacaaaccatagtcgagaccgaagttgaagag
ctcagacaaaaaattgaaggtgccaattatcaacaagtttatgaagagaaacagagaaag
accgacgaaatcaataaaaagcaaagggagaaaaataaccttctcggccagcaggaagag
gtacagactcaaattgatgagttatcggacgaattgagcagagccgacaacagaaatgcc
cacaaactatataaaaaagctcattatgaactatcgcttaacaaactagttatagaagac
ttgactaggtacgtcaatattttagagaaatccgtactgaaattccacgaagagagaatg
gtgcaaattaatacttccattagaaaattgtggagaaccatatatcgcggtaacgacata
gactacatcgaaatgaaaacagatgacactctggcagctggaaaacgtaggtcgtacaac
tataaagttgttcaagtgaaaaatggtatagaacttgacatgcgtggtagatgcagtgct
ggacaaaaggtactagcatgtttggtgattcgtatggcgctggctgaaacctttagctcg
cattgtggcattttggctttggacgaacccacgacgaatttggacaaagctaatatttgc
agtttgagtgatgctttgtcggaactgatcgccagcagagagaatcaaaccaatttccag
cttcttatcattacccacgatgaggaatttctgcgtagcataacgcaagtacagagtctt
gacaactactggcaggtcaagagaaacgatagaggctcttcaaccgtagaaaaagtgatg
ttgtag
DBGET
integrated database retrieval system
