Diabrotica virgifera virgifera (western corn rootworm): 114338456
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Entry
114338456 CDS
T09922
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03013
Nucleocytoplasmic transport
dvv03015
mRNA surveillance pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114338456
09122 Translation
03013 Nucleocytoplasmic transport
114338456
03015 mRNA surveillance pathway
114338456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114338456
03041 Spliceosome [BR:
dvv03041
]
114338456
03009 Ribosome biogenesis [BR:
dvv03009
]
114338456
03012 Translation factors [BR:
dvv03012
]
114338456
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114338456
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114338456
mRNA cycle factors
Stress granule specific factors
114338456
Spliceosome [BR:
dvv03041
]
Complex C
Other components
EJC/TREX
114338456
Ribosome biogenesis [BR:
dvv03009
]
Eukaryotic type
90S particles
Helicases
114338456
Translation factors [BR:
dvv03012
]
Eukaryotic type
Initiation factors
eIF-4
114338456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
114338456
NCBI-ProteinID:
XP_028144860
UniProt:
A0A6P7GM60
LinkDB
All DBs
Position
9:60367784..60412624
Genome browser
AA seq
402 aa
AA seq
DB search
MAVPKRGASVFEDLSNVEFETSEDVEVIEKFKNMNLKEELLRGIFAYGFEKPSAIQQRAI
KPIMKGRDVIAQAQSGTGKTATFSISILQALDLTMRETQVLCLSPTRELAVQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVKMLVLDEA
DEMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENNFTVSSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccaaaaagaggtgcctcagtttttgaggacttatcaaatgtagagtttgaa
actagtgaagatgtcgaagttatcgagaagtttaaaaacatgaaccttaaagaagaactt
cttcgtggtatcttcgcatatggcttcgaaaaaccctcagccattcaacagagagcaata
aagcctattatgaaaggaagagatgtaatagctcaggcacaatctggtactggtaaaaca
gctaccttttccatttcgattttacaagctttagatttgacaatgcgagaaacgcaagtt
ttatgcttgtctcctactagagaattggctgtacagattcaaaaagttattctagcttta
ggtgacttcatgaatgttcaatgtcatgcttgtattggaggcacaaatcttggggaagat
attagaaaacttgattatggacagcatgtcgttagtggaacacctggaagagtttatgat
atgatcagaagaagagctctaagaacaagatctgtaaaaatgttggttttagatgaggct
gatgaaatgttaaataaaggattcaaagaacaaatttatgatgtctacagattccttccc
ccatcaacacaagttgtactcatttcagctacactgcctcacgaaattttggaaattact
tccaaatttatgacagatcctattaggattttggtaaaacgtgatgaattgacattggag
ggtataaaacagttctttgtggctgtggaaagggaagaatggaaatttgacaccctctgt
gacctctacgatacattaaccattacacaggctgttattttctgcaacacaaagaggaag
gtagactggctgacggagaaaatgagggaaaacaattttacagttagttcaatgcacgga
gatatgccacaaaaggaacgtgacaatattatgaaagagtttaggtcaggacagagtagg
gtcctaatcacaactgatgtttgggctagaggtatcgacgtacaacaagtcagtttggtt
atcaattatgacttgccgaacaatcgtgaattgtacatccatcgtatcggtagatctggt
aggttcggccgaaagggtgtagccatcaatttcgtaaaatcagacgatatcagaattcta
agagatatcgaacaatattactcgacccaaattgacgaaatgccaatgaacgttgcggac
ttaatttaa
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