Diabrotica virgifera virgifera (western corn rootworm): 114339831
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Entry
114339831 CDS
T09922
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114339831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114339831
Spliceosome [BR:
dvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
114339831
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114339831
NCBI-ProteinID:
XP_028146322
UniProt:
A0A6P7GK38
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Position
7:9335353..9342796
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AA seq
493 aa
AA seq
DB search
MSLKDGPPRKLRKLEDIKPNVQQPITQSTIAVPSGSSTRLCPYLDTINRQYLDFDFEKLC
SVSLTRINVYACLVCGKYFQGRGTNTHAYTHSVAEGHHVFLNLQTLKFYCLPDNYEIIDS
SLHDIKYVLNPTFSEHHIKNLDGNTKLSRAIDGSLYVPGIVGLNNIKANDYCNVVLQGLS
HVTPLRNYFLREENYSKIKRPPGDSAYLLVTRFGELMRKLWNPRNFKAHVSPHEMLQAVV
LWSKKQFQFTQQGDPIDFLSWFLNALHKALNGTKKKDSSIIYKSFLGNMKIYTRKIPSTD
LNDKEKKTLLATPEYQEVETESPFLYLTCDLPPPPLFIDEFRENIIPQVNLYQLLTKFNG
QTEKEYKTYKENFMKRFEITRLPPYLILYIKRFTKNTFYVEKNPTIVNFPVRNVDFSEFL
TPEIQAKHRHTIYDLVANIVHDGEPNKGTYRVHILQKSTGQWYEMQDLHVTDILPQMITL
TEAYIQIYELRTQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaagatggaccaccaagaaaattaagaaaactggaagatataaaacccaat
gtccaacaacctataacacaaagtactatagcagttccttctggttcttctacaagactt
tgtccttatttggatacgataaacagacaatatttagattttgatttcgaaaagctgtgt
tcggtttcgttaaccagaattaatgtttatgcctgtttggtgtgtggcaaatatttccaa
ggaaggggcactaatacacatgcatacacacattctgtagctgaaggacatcatgtgttt
ctgaatttacaaaccctcaaattttattgtttgcctgataattatgaaataattgattct
tcattacacgatatcaaatatgtattaaatccaacattctcagagcatcatatcaagaat
ttggacggtaacactaaattatcaagagctatagatggttctctatatgtaccaggaatt
gttggtttgaacaatataaaggctaacgactattgtaacgttgtgttacagggtctttct
catgtgacacccctacgcaattactttttgagggaagaaaactacagcaagataaaaaga
cccccaggagattcagcatatttgttggtgacgagatttggtgaacttatgagaaaatta
tggaatcccagaaacttcaaggcacatgtttcgccccatgagatgcttcaagctgttgtt
ctttggagtaaaaaacaatttcagttcactcaacaaggtgatccaattgatttcctttct
tggtttttaaatgccctccacaaggcacttaatggcacaaagaagaaagatagctctata
atatacaaatcgttccttggcaatatgaaaatatacaccagaaaaataccatcaacagat
ttaaatgacaaggaaaagaagactcttttagcaaccccagaatatcaggaggtcgaaaca
gagtcacccttcttgtatttgacttgtgatcttccaccaccacccttgtttattgacgag
tttagggaaaatattattccacaggttaatttatatcaactattaacaaaatttaatggt
caaactgagaaagaatacaaaacttataaagaaaacttcatgaaacggtttgaaattacg
aggctgccaccttatcttatcttgtatataaaaagatttaccaaaaatactttttatgtg
gagaaaaatcctacgattgttaattttcctgtgaggaacgtggacttttctgaattccta
acacccgaaatccaagcaaagcatagacacacgatatacgatttggtagcaaacatcgta
cacgacggtgagccgaataaaggaacttacagggtgcacattttgcagaaatctaccggc
cagtggtatgaaatgcaggatctgcacgtgacggatattttaccgcagatgattacgtta
acggaagcttatatacaaatttatgaattaagaacacagtaa
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