Diabrotica virgifera virgifera (western corn rootworm): 114340166
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Entry
114340166 CDS
T09922
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114340166
03036 Chromosome and associated proteins [BR:
dvv03036
]
114340166
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114340166
Chromosome and associated proteins [BR:
dvv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114340166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
HHH_9
HHH_3
Spt6_S1
S1
Tex_YqgF
Tex_N
S1_RRP5
DUF4547
DUF2924
Motif
Other DBs
NCBI-GeneID:
114340166
NCBI-ProteinID:
XP_050511668
UniProt:
A0A6P7GBQ6
LinkDB
All DBs
Position
7:complement(93351947..93520495)
Genome browser
AA seq
1831 aa
AA seq
DB search
MADFIDSEAEESSEEEELDHRDRKKAQKAKVVDSSDEDDEDDDERLREELKDLIDDNPIE
ESDAESDASGREKRKKSDDEDLDDRLEDEDYDLLEENLGVKVERRKFKRLRRFEDEESEG
EEEHDPEQDREQIAMDIFSDDDRDDQQKKDDERRSERSHRPAVEQETYGVGEEEEEGEYS
DADDFIVDDDGRPIAEKKKKKKPIFTDAALQEAQETFGVDFDYDEFSKYDEDDYEDEEEE
DDEYEEDDVEKRKRPKKTSKKKPTKKSIFEVYEPSELKRGFFTDLDNEIRNTDIPERMQL
RDVPITAVPDDSTELDDEAEWIYRQAFCNRTVSNVDSHLSSEAREKLKKTHHAIGKIRKA
LDFIRNQQLEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKTRKENLLKLFEKMRS
YQTDHIMKDPDAPIPDNLRIMTESDIERLKNVQTAEELNDVHNHFILYYAADLPAMHAAW
RVKERERRRQERKEARLKLIAESEEGAEIPEEPEEIDDDEPEAETLKYANRSGSYALCNK
GGLGPLAKKFGLTPEEFAENLRDNYQRHEVDQEHIEPVEVAKEFVSPKFPTVEEVLQATK
HMVALQIAREPLVRKCVREIFFERARLNVYPTKKGVKVIDEAHNCYSMKYVKNKPVRDLA
GDQFLKLCLAEEENLLTITINDHIQGNTTNNYIDEVKQLYIKDEFSKHVQDWNALRMESV
ERALTKSVLPDLRSELKRTLLTEAKEFVLKACCRKLYNWIKIAPYAITFPDEDEDDWDTS
KGVRTMGVAYVPEHTVSAFTCISAPDGDITDYLRLPNILKRKNSFRTEEKLMKEADLQAL
KNFIFLKKPHVIAVGGESREALMIADDIRGVISELIESDQFPQIRVEIIDNELAKVYANS
IKGSTDFRDYPELLRQAISLARRMQDPLVEFSQLCNSDEEILSLRFHPLQEQVQKEELLE
ALCLEFVNRTNEVGVDINLAVQQIHKSSLVQFICGLGPRKGQALLKVLKQTNQRLENRTQ
LVTFCHMGPKVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEY
DDDEGANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDL
RQPFRSANPEELFDMLTKETPETFYIGKMVTSTVFGIARRKPKSDQLDQANPVRNDETGL
WQCPFCLKNDFPELSDVWNHFDAGACPGQATGVKLRLDNGILGYIYIKNISDKPVANPEE
RVGIGQLIHCRIIKIDVEKFSVDCTSKSSDLADKNHEWRPQRDPHYDQEREDKDNRLEAE
KKKEKQRMTYIKRVIVHPAFHNISYAEAEKCMVNMDQGEVIIRPSSKGADHLTITWKVTD
GIYQHIDIKEQGKVNAFSLGKSLWIGNEEFEDLDEIIARHVTPMAAHARDLLYFRYYKDF
QGGHKDKAEEYLKDEKKKNASKIHYVVSAAKNIPGKFLLSYLPRNKVRHEYVTVTPEGFR
FRQQMFDSVSSLFKWFKEHFREPPPGGATPGSTPRMASSRTGYGSATPAYSMNNEAIQRV
AQNLPSHVVQALSAATNQTPHYPHTPGYGGNYINTPYTPSGQTPYMTPYATPHTQQTPRY
GHQTPSQHMASSAPQGLNNPFLHPGAVTPSQRTPIYRNHPAQSPVMLPTSPVPSPGSQSS
YSSHLSHNQRSGSYAESLRFQPPESPRSSVSNRSFQTDRYGGDRYGKGGSHRYGGSSNED
RYGKGGGGNENTDWQKAAEAWARSRSTPRSDGRNTPRSVGQRTPRYDNDAERSRMKHLSK
SPRSVRSTPRTNTSPHSMSLGDATPLYDESI
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcatagattctgaagcagaagaaagtagtgaggaggaggaattagatcat
agggatcgtaaaaaagcccaaaaagccaaagttgtagatagttcagatgaagatgatgaa
gatgatgacgaaagactgagagaggaattaaaggatttgattgatgataatcctattgaa
gaaagtgatgctgagtctgatgcttcaggaagggaaaaacgtaagaaatctgacgacgag
gatttggatgatcgactggaagatgaagattatgatttgcttgaagaaaatttgggtgtt
aaagttgaaagaaggaaattcaagcgactgcggcgttttgaagatgaagaaagtgaagga
gaagaagaacatgatcctgaacaagatagggaacaaattgctatggatatattttcagat
gatgatagagatgaccaacaaaaaaaggacgatgaaagacgatcagaacgaagtcacaga
cctgccgtcgaacaagaaacttatggtgtaggcgaggaagaagaggaaggggagtactcg
gatgccgatgattttatagttgacgatgacggtagaccgatagctgaaaagaagaagaag
aaaaaaccaatatttactgatgccgctctccaagaggctcaagaaaccttcggtgtcgat
tttgattatgatgaatttagtaaatacgatgaagatgattacgaagatgaagaggaggag
gatgacgaatacgaggaagatgatgtagagaaaaggaaacggcctaaaaagacttcaaag
aaaaaaccgacgaagaaatccatttttgaagtgtatgaacctagtgaacttaaaagaggg
ttctttaccgatctcgataatgaaatccgaaacactgatattcccgaaagaatgcaactt
cgtgatgttccaatcaccgctgttccggatgactcaactgaacttgatgatgaagcagaa
tggatttacaggcaagcgttttgtaacagaactgtttccaatgtggattctcatttatca
tcagaggcaagagagaaattaaagaagactcatcatgccatcggaaaaatcagaaaagca
ttagattttataagaaatcaacaattagaagtaccgtttattgctttttatagaaaggag
tatgttcaaccggaacttaatattaacgatttgtggaaagtatataaatacgatgcaaag
tggtgccaattgaaaacacgcaaagaaaacctcttgaagctttttgaaaaaatgaggtca
tatcaaactgaccacataatgaaagatccagatgcaccaattccagacaaccttcgtatt
atgactgagtccgacattgagcgattgaaaaatgttcaaaccgccgaagagttaaatgac
gttcacaatcatttcattttatattatgctgcagatttgccagccatgcatgccgcgtgg
agagtcaaagaaagagaaaggagaagacaggaaagaaaggaggctagacttaagctcatc
gctgaaagtgaagaaggtgctgaaattcctgaagagcctgaggaaattgacgatgatgaa
ccagaagctgaaaccttaaaatacgccaatagatcaggcagctatgcactatgtaataaa
ggaggtttgggtcctctagcgaagaaatttggtttaacgcctgaagaatttgccgaaaac
ctgagagataattatcagaggcacgaagtagatcaagaacatatagaacctgtagaagtc
gctaaagaattcgtatcgccgaaatttcctacagtggaagaagtgttgcaagctactaaa
cacatggtagctttacaaatagcaagagaaccattagtaaggaaatgcgtaagagaaatt
ttctttgaacgagctagattaaacgtttatccaaccaaaaagggtgtgaaagttatagat
gaagctcataattgctatagtatgaagtatgtaaaaaataaaccagtaagagatcttgca
ggcgaccaatttttaaaattatgtttagccgaagaggagaacctccttactattaccatc
aatgaccatattcaaggaaacactactaacaattacattgatgaagtcaaacaattatat
ataaaggatgaattcagcaaacacgttcaggattggaatgcgctaagaatggaatcggta
gaaagggctttaacgaaaagtgtcttaccagatttaagatctgaattaaaacgaacgttg
ctcacagaggctaaagaattcgtattaaaagcttgctgtagaaaattatataattggata
aagattgctccatacgcaataacttttcccgatgaagacgaagatgattgggatacatcc
aaaggtgttagaactatgggtgtagcatacgtaccagagcacacagtatcagcttttacc
tgtatttcagcaccagacggagatataactgattatctcagattaccaaatattctaaaa
agaaaaaatagctttcgaactgaagaaaaacttatgaaggaagctgatcttcaagcactg
aaaaatttcatattccttaaaaagcctcatgtgatagcagtagggggtgagtccagagaa
gccttaatgatcgctgatgatatcagaggagtaataagtgaactaatagaatccgaccaa
ttcccacagattagggttgaaattattgataatgaattagccaaagtgtacgcaaattcc
attaaaggttcaactgatttcagagattatccagagttgttaaggcaagctatttcatta
gctcgaagaatgcaagatcctttggttgaattttcccaattatgtaatagcgatgaggaa
attttgagtctgaggtttcatcccttgcaggaacaagtccagaaagaagaactactagaa
gctctctgtttagaatttgtcaacagaacaaatgaagtaggtgtagatataaatcttgcc
gttcagcagattcataaaagtagtttagttcaattcatatgcggtctaggaccgcgtaaa
ggtcaagcgttacttaaagttctgaaacaaactaatcagaggcttgaaaacagaacccaa
ttggttacattttgtcatatgggtccaaaagtttttattaattgttctggattcataaag
attgataccaatagtttaggagacagtactgaggcatatgttgaaatattggatggctct
cgagttcatcccgaaacttatgaatgggcacgaaaaatggctgtggatgctttagaatat
gacgatgatgagggagctaatccggcgggagctttagaggaaattctcgaggcgccagag
aggttaaaagatcttgacttggatgcatttgcggaggaattggaaagacaaggatttggt
aacaagagtataacattgtatgacattagagcagaactgaactcgcgatataaagatttg
agacaaccttttcgttctgcaaatcctgaagaactattcgatatgcttactaaagaaact
cccgaaacattttatattggaaaaatggttacatctaccgtgtttggcattgcaaggaga
aaaccaaagtcagaccagctcgatcaagctaatccggtccgtaatgacgaaactggtttg
tggcagtgccccttctgtttgaaaaatgattttcctgaattatctgatgtatggaatcat
tttgatgcaggagcatgtcctggtcaagctactggagttaaactaagactggataatggt
atattaggttatatttatataaaaaatataagcgacaaaccagttgctaatccggaagaa
agagtaggcataggacaattaattcactgtagaataataaaaattgacgtagagaagttt
agtgttgattgtacatcgaaatctagcgatcttgctgataaaaatcatgaatggagacct
caacgagatcctcattatgatcaagaacgtgaagacaaagacaatcgattagaagccgag
aagaagaaagagaaacagcgtatgacgtacatcaagagggttatcgttcatccggcgttc
cataacatatcctatgccgaagccgaaaaatgtatggttaatatggaccagggtgaagtt
atcattaggccttcgagtaagggtgcggatcatttgaccattacttggaaggttacggat
ggaatctatcaacacattgatattaaggaacaagggaaagttaacgctttttctttagga
aaatcattatggattggaaatgaagaatttgaagatcttgatgaaataatagctaggcac
gttacaccaatggcggcgcatgctagagatttactgtattttaggtattacaaagatttc
caaggtggtcataaagataaggctgaggaatatctaaaagatgaaaaaaagaaaaatgct
tctaaaattcattatgtagttagtgctgctaagaatatacctggtaaatttcttctttcg
tatcttccacgcaacaaagttagacacgaatatgtaacagttactccagaaggctttcgg
tttagacaacaaatgtttgattccgtttcttcgttatttaaatggttcaaagaacatttc
cgggagcctccgccaggcggtgcaacaccaggtagcacgccaaggatggcttcaagcaga
actggatatggaagtgccacacccgcgtatagtatgaataatgaagctattcaaagagtt
gctcaaaatttgccaagtcatgtagttcaagcgttatctgctgccaccaaccaaactcca
cattatccccacacccctggttatggaggcaattatattaatacgccttacactccaagt
ggtcaaactccatacatgactccgtacgctacaccccatacgcagcaaactccccgctat
ggtcatcaaacaccttcccaacacatggcgagctcagcaccacaaggtctcaacaatccc
tttttacatcctggcgcggtgactccctcccaacgaactcctatttatcgcaaccatcct
gcacaatctccagtaatgcttcctacaagccctgtaccaagtccaggttcccagagttca
tacagtagtcatttaagtcataatcagcgaagtggaagttatgctgaatccttaagattc
caacctcccgaatcgccgagaagctcagtgagtaatagaagctttcaaactgatagatac
ggcggtgataggtatggtaaaggaggaagtcatagatatggtggaagctcaaacgaagat
agatatggtaagggaggaggaggaaatgaaaatacggattggcagaaagctgcagaagca
tgggctcgatctagatctactccgagaagtgatggccgtaatactccaagatctgtaggt
caacgaactcctagatacgacaacgacgccgaacgttctagaatgaaacacctcagcaag
agcccgaggtctgttaggtctactcctcgaaccaatacatctccacattctatgtcccta
ggtgatgctacccctctgtatgacgaaagtatctaa
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integrated database retrieval system
