Diabrotica virgifera virgifera (western corn rootworm): 114342070
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Entry
114342070 CDS
T09922
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114342070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114342070
Enzymes [BR:
dvv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
114342070
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
114342070
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
114342070
NCBI-ProteinID:
XP_028148668
UniProt:
A0A6P7GTI1
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Position
8:complement(221668312..221700869)
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AA seq
519 aa
AA seq
DB search
MPGAGPFVYNVFVFMFLSFSKVSSFAFSRIFSFHRSSEAVFLLNRTLFINMPPKRKLAAA
ATTSSLASGSEGQVKKRGRPAKEEKVEANGKEDKVEENGKVEDEKQNGVRALRARSGRTN
KTTTQQASVKPEVNGHIDDDNVTKVSKGRGKKAKGNKEISEATPIKTKRAPRKNATKKEE
SKKPEKSTKKIKKAAADSSSEADPPKKSKKPRSAKSKEEIVDVEENNDEEPPVKKTKVLL
NKTTTDWNSIDFSCSMKNKYDVSYNVIISTWNIGGLKSWASKGCMEYLNHESPDIFCVQE
TKCNESKLPEEIKNKKLYKQYWCSSEKEGYAGVGIFTVKEPKSVTYGIEDDEQDEDGRCI
TAEYDTFYLVNVYVPNAGRKLVTLDKRLRWNDSFKNYILKLDEKKPVIICGDMNVSHQEI
DLARPKNNTKNAGFTPQERDGMTDFLKAGFIDVYRHMYPEEKDVYSFWTYMSNARSKNIG
WRLDYFLVSEKLMKGVCDVKYRTEVLGSDHCPVTLFINA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgcaggcccatttgtttataacgtttttgtatttatgtttctcagtttctcc
aaagtctccagtttcgcattttctcgtattttttcatttcaccgaagttctgaggctgtg
ttcttgttgaacagaactttatttattaatatgccaccaaaaagaaaattagccgcagcc
gcaactacttcaagtcttgcttcaggatcagaaggacaagttaaaaagagaggaaggcca
gccaaagaagaaaaggtagaagcgaatggcaaagaagataaggtagaagagaatggcaaa
gtagaggatgaaaagcagaatggagttcgtgcattaagagcacgttctggtaggacaaat
aaaacaacaacacaacaagcttctgttaaaccagaagttaatggacacatagatgatgac
aatgtaactaaggtttccaaaggaaggggaaagaaagcaaaagggaacaaagaaatcagt
gaagccacacctataaaaaccaaacgtgcccccaggaagaatgcaacaaaaaaagaagaa
tctaaaaaacctgaaaaatccacaaagaaaattaagaaagcggctgctgattcttcttct
gaagctgatccacccaagaagtcaaagaaacccaggagtgcaaagtcaaaagaggaaata
gtcgacgttgaagaaaataatgatgaggaaccgccggtgaaaaagactaaagtcctctta
aacaaaactaccaccgattggaattcgatagatttttcttgttccatgaaaaataaatat
gatgtttcctacaatgtaattataagtacttggaatattggaggcctcaaaagctgggca
agcaagggttgcatggagtatctcaaccatgaaagtccggacatattctgtgtacaggaa
accaaatgcaatgaatctaagctacccgaagagataaagaacaagaaactttacaaacag
tattggtgttccagtgagaaagagggttatgctggagtaggaatatttaccgtgaaagaa
cccaaaagtgtcacctatggtatcgaggatgacgagcaagatgaagatggtagatgtatc
actgccgagtatgacacgttttacttggttaatgtatatgttcctaatgcaggacgaaaa
ttggttacgctggacaaaagactgaggtggaacgattcctttaaaaattatatcttgaaa
cttgacgagaagaagccagttataatttgtggtgacatgaatgtctctcatcaggaaata
gacttagcgagacctaaaaacaacaccaaaaacgctggatttactcctcaagaaagggat
ggtatgacagacttcctaaaggcaggatttattgacgtatatagacatatgtatccagaa
gagaaagatgtttattctttctggacctacatgtcgaatgctagatcaaagaatattgga
tggcggctagactactttttagtttccgaaaaactgatgaagggggtctgtgatgttaaa
tatagaacagaagtattagggtccgatcactgccctgtaacacttttcatcaatgcataa
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