Diabrotica virgifera virgifera (western corn rootworm): 114342439
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Entry
114342439 CDS
T09922
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dvv04121
]
114342439
Enzymes [BR:
dvv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114342439
Ubiquitin system [BR:
dvv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114342439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Helicase_C
zf-RING_UBOX
PHD
TPR_12
TPR_1
TPR_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
114342439
NCBI-ProteinID:
XP_050509729
UniProt:
A0ABM5KHP2
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All DBs
Position
6:complement(225917154..226077985)
Genome browser
AA seq
1395 aa
AA seq
DB search
MSGRKNTLIKHGTDTVEYLDYIPVVSKRGNVVSSNPEKFIKVNIPKKSCRQWYLGEILMG
SINSTFPGRLKPVKVSFKFKDDSPEEEGLFDKIKVLFDSDPVIVTNYTNNASFIKEVMSL
TKTLSFDFSCRGDNLFLRIYFTQLPLPQFYPKIGNCLKDLFIQLFGQICSNTYDNFENTS
KKFRGKSEIQNLYDKLKEKRKTDKFDYNVEENVQHHNLKSKLKPYQQESVKWMLYRERME
DSKTDFLDPFYILIKLTSNNEIYFNKYTGFVCNEKPITTLSTKVGILGDEMGLGKAVEVL
SCILLNPKIEPKEDKNDHSRKRKSFIDESNDPIIKIPQKKSKQIQEPKKPSYVIKPREVQ
VIKPREVQVTKSKEVKGKTIHSKRFENVDRISVRCVCRENGVSEETAIKCTSCNIYQHPK
CLGYTKSLGRYFCPQCWINQPLIESKATLIVTPVALKNQWCNEIAKYVKGNLRVLQYQGH
SVNPVYPTELKEYDIVLTTYSMLQHELKPEANTLRQGKKSFKPCCPLTRIKWWRLCLDEA
QTVDTPDHLVSVMARKIEAVHRWAVTGTPISKNVSDLYCLIDCLQISPYNDIATWQKILY
QPYLVGNEEPLLNFLSTILWRTVKKDVADQADIPKQTYLHHTLDFCAMEKYFYKKQLKLS
GHVLEKRCSPYNPAICLDNLAKQNIFGQALENILEPVLDLRRMCVIMTSSKMKAFKYVLN
TRISDNFNDMRDCFQLIISKYNGLAGIHLLLKNPQEAINAYREVLRLVAKFPDEDFPGTM
GFCRELSSDKLQVIHTLYNLAEVLDMYPPEHPTLRDTSLRNDCEEWEQKYLRERIDYPSN
WLFDYYTETMDRLQKQFLLKDGQWYSDGLDWIVLNGLSKEFHAKIDTACKAANIENKTRD
VRDWTLLRLLCNWENALYTLRKEVFAAVADLYENAPHNRFKVVIKKSVVTKAMNCHLRPQ
EKREKSTKKCPTCLFNKCLEKYELTLCYYRECGYNEHVYDWKPTPTLPEIVMQSLHSILK
LHKADKKLIQDGEIQSNIIKTLKQEYRELYSFWDDLKMQVWDLYQFNMCKVRLQLKPEEE
EEKEEINNTLNSLTYKLQSKGKTRHLLSVHELDHQLKLHQTDISEKTRKFEKLWAEHIDL
NKQLSEGRGPYPCPICHNQLELHWCALSCGHYYCFECIEVMLQQVAEDFIECSVCRDRQL
HKVSYIDARETVTDCPKIEKYIYSTKISQIVKVLMELKKEDKGVKVLLFSSWEDVLDVVK
KELDKNEISSELALPDNVNVKIRNFKNPAKNVTVLLLPVELELKDINLSEANHIMFAEPL
MNPEDELQAIGRIDRIGQKRDTFIHKFLMKNTIEEDIHQATTSNAQKWGKKVVTIQRLLD
LFKVPELADRPEEET
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaagaaagaatacgctaataaagcatggaaccgacacagttgaatatttagat
tacattcctgtagttagtaagcgtggaaatgtagtttctagtaatccagagaagtttatc
aaggtaaatattcccaaaaagtcgtgcagacaatggtatttgggagaaatattaatggga
tctattaatagcacattccctggccgtttaaaaccagtaaaagtatctttcaagttcaaa
gatgatagtcctgaggaagagggtctgttcgacaagattaaagtattatttgattctgat
cctgtaattgttacaaattacaccaataatgcaagctttattaaagaggtaatgagtttg
acaaagacattgtcatttgatttttcatgtagaggtgataatttgttcctgagaatatat
tttactcaactaccactgccacagttttacccaaagataggaaactgcctgaaagatctt
tttatacagctttttggacaaatttgttccaatacatatgataattttgaaaatacttcc
aaaaaattccgtggcaagtcagagatacagaacttgtatgataaattaaaagaaaaaagg
aagactgataaatttgattataatgttgaggaaaatgtgcagcatcacaatttaaaatct
aagttgaagccttatcaacaagagtcagtgaagtggatgctatatcgagaaagaatggag
gatagtaaaacagatttcttggacccattttacatcctaatcaaattaacatcaaataac
gagatatattttaacaagtacacaggatttgtatgtaatgaaaagccaataactactctc
tctactaaagttggcattctgggtgatgaaatgggtctaggaaaggctgtagaggttcta
tcatgtattttactcaatcccaaaattgaaccaaaagaagataaaaatgatcattcgaga
aaacgtaagagtttcattgacgaatctaatgatcccattatcaaaattccacaaaagaaa
tctaaacagatacaggaacctaagaaaccatcgtatgttataaaaccaagggaggtacag
gtaataaaaccaagggaggtacaagtaacaaaatcaaaggaggtaaaaggcaaaaccatt
cattccaaacgatttgaaaatgttgatagaatatctgttcggtgtgtttgtagagaaaac
ggtgtgtcagaggaaacagctattaaatgcacaagttgtaatatatatcaacaccccaaa
tgcttgggatacacaaaatctttagggaggtatttttgtccacaatgctggatcaaccag
ccacttatagagtccaaagctactctaatagtaactcctgtagctttgaaaaaccagtgg
tgcaacgaaattgccaaatatgttaaaggaaacttgagagttctgcagtatcaaggacac
agtgttaaccctgtttaccccactgagctaaaagagtacgacattgttttaaccacttac
agtatgcttcagcacgaattaaaaccagaggccaatactttaagacagggaaaaaagtcc
tttaaaccttgttgtccattgacaaggatcaaatggtggaggctttgcctggatgaggcg
caaactgtcgacactcctgaccatctggtgtctgtgatggctaggaaaattgaagctgtt
catcgctgggcggtgactggaacgcccatttcaaagaacgtatcagatttatactgctta
atagattgcttacaaatatctccttataacgatattgctacatggcagaagatcttatac
caaccatatttagtgggcaacgaagaaccgttgttgaattttttatcaacgatcctgtgg
agaactgtgaagaaagatgtagcggatcaagccgacataccgaaacaaacctacttgcac
cacacgctggacttttgtgcgatggaaaagtatttttacaagaagcaactcaaactcagt
ggccacgttttggaaaaaagatgtagtccctacaatcctgctatatgtctcgataatttg
gccaagcaaaatatatttggacaggctctagaaaatatattagaaccagtattagactta
agacggatgtgtgttattatgacatcgtctaaaatgaaggcatttaaatatgtactgaat
acgcgaatttccgataactttaacgatatgagagattgtttccaactaattatttcgaaa
tataacggtttagctggtatccatttactgctgaaaaatccacaagaagctataaatgcg
tacagagaagtgttacggctggtcgctaaatttcccgacgaagattttccgggtacgatg
ggattttgccgggaactttcctcggataaattacaagttatccacacgttgtataatctc
gcagaagtgttagatatgtatccaccggagcatcctaccttgcgagacaccagtttacga
aatgattgcgaggagtgggagcagaaatatttgcgggagcgcatagattatccgtcgaac
tggttgtttgattattatacagagactatggaccggttacagaaacagtttttgctcaaa
gatggtcagtggtattcggatggtttagactggatagttctgaatggtctttccaaagaa
tttcatgccaaaatagatacagcatgcaaagcagcgaacattgaaaacaagacaagagac
gtcagagactggactctccttcgactcctatgcaattgggaaaatgctctgtataccttg
aggaaggaagtgttcgccgccgttgccgatctctacgagaacgcaccacacaacagattt
aaagttgtcattaagaagtctgtggtgaccaaggcgatgaactgtcacttgcggccccag
gaaaaacgagaaaaatcgacgaagaaatgtccgacgtgtctctttaacaagtgtttggag
aaatacgagttaacattgtgttattatagagagtgcggatacaacgaacatgtgtatgac
tggaagccgacgccgacgctcccagaaatcgtcatgcaatcattacacagcatcctaaaa
ctacataaggcggataaaaaattaattcaagatggcgaaatacaaagtaatattattaaa
accttgaaacaggagtatagggaactgtactctttctgggatgacttaaaaatgcaggtt
tgggatctttatcaatttaacatgtgcaaagtgcggttgcagctcaaacccgaagaagaa
gaagaaaaggaggaaattaacaataccttgaatagcttaacctacaaattacagagcaaa
ggcaaaaccagacatttacttagcgttcacgagctagatcaccagttgaaattacatcaa
accgatattagtgagaaaacaagaaagtttgagaagctttgggctgagcacattgatcta
aacaagcaactttctgaaggccgtggtccatatccttgccctatttgtcacaatcaactg
gaactacattggtgtgccttatcctgtggacattactattgtttcgagtgtatagaagtg
atgttacagcaggttgcagaagactttatagaatgttctgtatgcagagatagacagttg
cataaagtctcatacattgacgccagagaaacagttacagactgccctaaaatagaaaaa
tacatttactccacgaagatatcacaaatagtgaaagtgttaatggaattgaagaaagaa
gataaaggcgtcaaagtattgcttttttcgtcgtgggaagacgttttagatgttgtaaag
aaagagttagataagaacgagatttcgtctgaattggcactgcctgataacgttaacgtc
aaaattagaaattttaagaatcctgccaagaatgtcacagtccttcttctaccagtagag
ttggaattgaaagatataaatttatccgaagctaatcacattatgttcgcggaacctctt
atgaatcctgaggatgaactacaagcgattggtagaattgaccgaataggacaaaaaaga
gacaccttcatccacaagttcctgatgaaaaacaccatagaagaagatatacatcaggcg
acaacatcaaatgctcaaaaatggggaaaaaaagttgtgaccattcaacgactgttagat
ttgtttaaggtgccggagttggctgatcgtcctgaagaagagacttaa
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